Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq1551 125 2e-24 >seq1551 Length=1910 Score = 125 bits (138), Expect = 2e-24 Identities = 207/293 (71%), Gaps = 8/293 (3%) Strand=Plus/Minus Query 6168 ATGATTAACAACGTTGTA-TTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGATATAC 6226 |||||||| | || || ||| | || |||||||| || ||| ||| || | |||| Sbjct 1907 ATGATTAATACAGTAGTTCTTACT-GGACGCTTAACACGAGACGTTGA--TTTGCGATAC 1851 Query 6227 ACCACAGAA---CCAAGCAGTAGGCACATTTGGATTAGCTGTAAATCGTCAGTTTAAGAA 6283 ||| || || | ||||| || || ||| ||||||| | |||| || | || Sbjct 1850 ACC-CAAAATGGCGCGGCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAA 1792 Query 6284 CGCCAATGGAGAGCGAGAAGCTGACTTCATTAATTGTGTTATTTGGCGACAACAAGCCGA 6343 | ||||| || || |||||||||||| | || ||||||||||||||| || ||| || Sbjct 1791 TTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGA 1732 Query 6344 AAATTTAGCCAAATTTGCTAAAAAAGGCGCTTTGATTGGAATAACTGGACGAATTCAAAC 6403 ||| || ||||| || | | || || | | ||||||| || || ||||| || Sbjct 1731 AAACTTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGAC 1672 Query 6404 ACGAAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTG 6456 ||||| || |||||| | || || ||| |||||||||||||||||| |||| Sbjct 1671 CCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGTTG 1619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120405727704708