Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4471 116 4e-21 >seq4471 Length=3711889 Score = 116 bits (128), Expect = 4e-21 Identities = 339/520 (65%), Gaps = 4/520 (1%) Strand=Plus/Minus Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266 ||||| || || || | ||| || || | ||||||||||| || ||||| | || Sbjct 604044 GCAAAGTCGCAGTGCAAGCCTTCGTCCCGGGATATAAGTTCGTTGGAGAATGTCAGGCCC 603985 Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326 ||||||| || ||||| |||| ||| || || | ||||| ||| |||||| || Sbjct 603984 GGCATCAGGCCACGTTTCTTTAGCCAGAAAATAGAGGCGAAGCTGCCGCTAAAGAAGATG 603925 Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14386 ||||| || || ||||| || || | ||| |||||||| ||| ||| || ||| Sbjct 603924 CCCTCTACGGCGGCAAAGGCGATAATTCGCTCTCCAAAATTGGCTGACTTGGATGAGATC 603865 Query 14387 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14446 || ||||| || | || || | | ||| || || || ||||| || Sbjct 603864 CAGGAAAGCGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATCGTCTCGATGGCATTGAAC 603805 Query 14447 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506 | | ||| || | | | | |||||||| || || || | ||||||||||| Sbjct 603804 AGGTACTCCCGCTGATGCGGATCTCGGATGTATGTGTCGATCAGGACACTATACATTTCG 603745 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATT 14564 ||||| | ||||||||| || ||||| ||||| || || || | || || ||| | | Sbjct 603744 GAGTGCACGTTTTCCATTGCGATCTGGAAACCGTAGAAGCAGCGTGCCTCAGTGATC--T 603687 Query 14565 GTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAA 14624 | ||||| | ||||| || ||| || || || || || ||||| ||| |||| Sbjct 603686 GAACCTCCTGGCTAAATCGCTCAACCAGGTTCTCGTTCACGATTCCATCGGAAGCGGCAA 603627 Query 14625 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGG 14684 | || |||| | || | || |||| |||| || | | || | ||| || | Sbjct 603626 AGAAGGCCAGCACGTGTGAGATGAAGTGACGCTCGTCGTCCTTTAGGCGATGCCAGTCCG 603567 Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14724 | |||||| || ||||| ||||| || || ||||| || Sbjct 603566 TCAGATCCTTGGACAGATCCACTTCCTCCACAGTCCAGAA 603527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482315778983280