Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4563 223 3e-53 >seq4563 Length=5383265 Score = 223 bits (246), Expect = 3e-53 Identities = 1182/1864 (63%), Gaps = 34/1864 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||| | || | ||| | || | ||||| | || |||||||||||| ||| Sbjct 4594968 TCCACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTCCGCAGATAATACATTCCGGTT 4594909 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || ||||| | |||| |||||| || || ||||||||| | || | || | Sbjct 4594908 TTGAGCCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTCAGTTTTCCATAGTTTGGCTCT 4594849 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 ||| || ||| | | || ||||| ||||||||||||||||| | || || |||||| Sbjct 4594848 GCTACATGTATATTAAAGGACTGACTCTGATCTATAAACGCACCACGATCAGCGGCCATT 4594789 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | | | || ||| || |||||||| ||||| || | | | || | | Sbjct 4594788 TTAATTGTGGACTTCACAGAGATTTCCCAAACGGTTTTGTAAAGGTCACGAACCTTCTGT 4594729 Query 37030 GGTAAA---TCTAAATGTTGAATAGAACCATTA-TGTAACACAATTGTATTCTTTATGTC 37085 || | | || | || |||||| ||||| | || || | ||| ||||| ||||| Sbjct 4594728 GGAATAGTCTCAATATTTTGAATTGAACCCCTGCTGGAAATGATTTGG-TTCTTCATGTC 4594670 Query 37086 ATTATTCCACATATTTCTACTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAA 37144 || | ||||| | | | || | | | || ||||| | || | || || ||||| | Sbjct 4594669 ATCGTCCCACA-AGTCCAGCTCAGTCAAGTCCCTCAACAAATGATGGTTAACCACCTGGA 4594611 Query 37145 AATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCAT 37204 | || ||||| | |||||||| ||||| ||||| ||||||| || || | || || | Sbjct 4594610 ATTCGCCAGACAGAACTCTTCTGGTATAAATATTAGTAGTATACGGCTCGAAAGATTCGT 4594551 Query 37205 TATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTC 37264 | || | | || |||| |||||||| || ||||| || || | || ||| || | Sbjct 4594550 TGTTGCCCATAATCTGAGCAGTAGATGCTGTTGGCATAGGAGCAACCAGCAGGGAGTTCC 4594491 Query 37265 TCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGT 37324 | || || | || || || ||||| | | ||| ||||| | | || || Sbjct 4594490 GGACACCGTGCTTCTTTATCGACTCCTTTAGCTTTTGCCAGTCCCAGAGGTTCGTCGGAA 4594431 Query 37325 TCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCT 37384 || |||||| || || || | ||| ||||| || | || | | ||| || | Sbjct 4594430 CTTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTTACCGGGCTTCCCTCATAAGTTT 4594371 Query 37385 CATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTG 37444 | || || || | || | ||||| ||| ||||| | ||| | || |||| || || | Sbjct 4594370 CGTATGGGCCTTCGATCTGAGCTAATTCACAACTGGCTTCCAAAGCCCCATAGTAAATCG 4594311 Query 37445 TTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATA 37504 ||||||| || || ||| || | | ||||| || || || ||| | | || | Sbjct 4594310 TTTCGAATATCTGCTGATTCAAGAGGCTCGCTTCATCACTTTCATATGGGAATCGCATGA 4594251 Query 37505 ATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAG 37564 || || ||||||| || |||||||| ||||| || | ||| | ||| || ||| | Sbjct 4594250 GAATTAATGCATCAGCAAAGCCCTGAACTCCGATGCCCACGGGGCGATGCCTCAAATTGG 4594191 Query 37565 ATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAA 37624 | | | ||| || |||||| | |||||||| ||||| || || |||||| Sbjct 4594190 ACTTCCTTGCCTCTGGCAGCGGATAAAAGTTGATATCGATTATCTTGTTGAGATTT---- 4594135 Query 37625 CTAGTA----TTTTCGTAATTATTCTCAACTTGTCGAA--CATAAATACGTTATTAT-TA 37677 || ||| | || || | | | | || | ||| | || | || | | Sbjct 4594134 CTGGTAACCGTCTTGGTGACTTCCTTTAGTTTTTTGAAATCGTATGTCTTTTCCGGTGTG 4594075 Query 37678 ACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTA 37737 ||||| | | | | ||| ||| | | ||||| || |||| ||||| | Sbjct 4594074 ACAAACATGTTAAGAGCAATGGATGCCAAGTTACAAACTGCAATCTCATCCGGGGAGGAG 4594015 Query 37738 AATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTG 37797 | | | ||| ||||| || | ||||| || |||| || || | ||| || || Sbjct 4594014 TACTCGACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCAACATTCTGCTGGTTA 4593955 Query 37798 GATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCC 37857 || | || || | ||| || | || |||||||| |||| ||| | ||| || Sbjct 4593954 CTCTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGATTTCCAGTTTCCACTTGTGCT 4593895 Query 37858 TCGATAATAGATTTCCATAAACTTCTTGCTTTAAC-GATCGCTTTA-AtttttttCTTTG 37915 || ||||| | |||||| | || ||||| | ||| || | |||| Sbjct 4593894 TCAATAATGGCGAACCATAAGGATTGAGCCTTAACTGTTCGGTTGGCACGGCCCTCTTGC 4593835 Query 37916 TTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGAC 37975 | | |||| | |||||| || | ||| |||| |||||||||||| | || || | Sbjct 4593834 T--CATATTTCACATATAACTTTTCAAATTCATCGCCCCATACATCGTGAAGGCCAGGGC 4593777 Query 37976 ATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAAT 38035 ||| | || ||||| || ||||| ||| ||| ||||| |||| ||| || | || Sbjct 4593776 ATTTGTGCGGGCACATAAGGGACCAATCTCCATTGGCCTCTACACGTTTCATGAAAAGAT 4593717 Query 38036 CAGGTACCCATAATGCAGTAAATAA-ATCTTTGGTTCTATATTCTTCGTTCCCTACATTC 38094 |||||| ||| || || ||||| || |||| || | || ||||| || || | | Sbjct 4593716 CAGGTATCCACAAGGC-GTAAAAAAGATCTCGGGCGCGATTCTCTTCCTTGCC-AGTGTT 4593659 Query 38095 TTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACAT 38153 |||||| || | ||||| || || | ||||| |||||| || || | ||||| | | Sbjct 4593658 TTTCTTGAGTTCCAGAAATTCAAAGACATCAGAGTGCCAGGGCTCCAGGTAAATAGCAAA 4593599 Query 38154 TGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCT 38213 |||||||| | || | |||||||||| | ||| | | |||||| | | || Sbjct 4593598 GGCTCCTGGACGCTTGCCGCCTCCCTGATCCACATAACGCGCAACGTTATTGAAGACCCT 4593539 Query 38214 TAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGC 38273 | ||| || || | ||||| || | || ||| | ||| |||| |||||||||| || Sbjct 4593538 CAGCATGGGAACCAGTCCATTGGAAGTTCCATTTGTTCCGCATATCGAAGTACCCTTTGC 4593479 Query 38274 TCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTG 38333 ||| ||| | | | ||| || ||||| ||| ||| || || | || ||||| Sbjct 4593478 TCGGATACAATGAACATTTAGTCCAATGCCACCAGCAGATTTAGAAATCATGGCACATTG 4593419 Query 38334 TTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393 | | | | ||| || ||||| || ||| | | || | || | ||||| Sbjct 4593418 CTCCACAGACTTAAAAATGCCTTCGATGGAGTCGGCTGTCATGGTTAAAAGGAAACATGA 4593359 Query 38394 AGACATTTGAGGCAATGGAGTTCCGGC-GTT--AAATAATGTAGGAGATGCATGTATGAA 38450 ||| | || ||| || || ||| | | ||| | || || |||||||| |||| Sbjct 4593358 AGATAGCTGCGGC---CGATTTGTGGCTGCTGCAAAAAGCGTTGGTGATGCATGAGTGAA 4593302 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 | || |||||| |||||| ||||||| | | || ||||| | ||||| || Sbjct 4593301 GTACCGCTCTGACAAAAGATTATACGTTTCTACGGCCGCGTCGATATCTTCCCCGTGGAT 4593242 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTA-TTATTCTGTT 38569 || | | || | ||| | ||||||||| || | ||| || ||| |||| || Sbjct 4593241 TCCGATCGCAACGCGCATCAACATATGTTGCGGCCGTTCAGCGATCTTACCGTTTCTCTT 4593182 Query 38570 TAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTAT 38629 ||| | ||| || ||| | ||||| | || |||||| |||| | | || | || Sbjct 4593181 TAA-CAAATAAGAACGTTCGAGGGTTTTAAACCCGAAATAATTATACCCAAAGTCGCGAT 4593123 Query 38630 CGTA 38633 |||| Sbjct 4593122 CGTA 4593119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468495833454240