Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4563 201 1e-46 >seq4563 Length=5383265 Score = 201 bits (222), Expect = 1e-46 Identities = 294/416 (71%), Gaps = 6/416 (1%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 ||||| || || ||||| || ||||| | ||| |||| ||||||||||||||| ||| Sbjct 3137450 AGGGGCTCTACATGGTTCAGATAGACGTGTGTGTCGCCCATGGTGTGCACAAAGTCGCCC 3137391 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || |||| ||||| || || ||||||| || || |||||||||||| ||||||||| Sbjct 3137390 GGCTTCAGACCCGTCACATGGGCGATCATGTAGGTAAGGAGGGCGTAGGAGGCGATGTTG 3137331 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC 21104 || || || || | ||||||||||||| ||| ||||| |||||||| || ||||| Sbjct 3137330 AAGGGCACGCCCAAGCCCATGTCGGCGCTCCTTTGGTAGAGCTGGCACGAAAGCTCATTT 3137271 Query 21105 CGAGCC------ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCG 21158 || | | ||||| ||||| || ||| || || || ||||||||| | Sbjct 3137270 CGGGTCTGTGAGACGTAGAACTGCGCCAGGCAGTGGCACGGCGGAAGAGCCATCTTTGGA 3137211 Query 21159 AGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATT 21218 | |||| || |||||||| |||||| ||| |||| || || | ||||| Sbjct 3137210 ATGTCCAATGGATTCCACGCTGACATAATGATACGCCTGTCCGAAGGGTTATTCTTAATG 3137151 Query 21219 AGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCC 21278 || | ||| | ||||| ||||| | |||| || | || | | | ||| | | Sbjct 3137150 GTGTCGATCACTTGACGCAATTGGTCGATGCCCTTGCCGGCATAATCGTCTTCGCAGCTC 3137091 Query 21279 CTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 | ||||||||| ||||| || | ||||||||| ||||||||||| |||| ||||| Sbjct 3137090 CCGTACTCCGCACCAAAGTGCCGCCACTGGAATCCGTACACCGGACCCAAGTCGCC 3137035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427750213930080