Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4471 123 2e-23 >seq4471 Length=3711889 Score = 123 bits (136), Expect = 2e-23 Identities = 338/518 (65%), Gaps = 0/518 (0%) Strand=Plus/Minus Query 13875 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13934 ||||| || || || | ||| || || | ||||||||||| || ||||| | || Sbjct 604044 GCAAAGTCGCAGTGCAAGCCTTCGTCCCGGGATATAAGTTCGTTGGAGAATGTCAGGCCC 603985 Query 13935 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATT 13994 ||||||| || ||||| |||| ||| || || | || || ||| |||||| || Sbjct 603984 GGCATCAGGCCACGTTTCTTTAGCCAGAAAATAGAGGCGAAGCTGCCGCTAAAGAAGATG 603925 Query 13995 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14054 ||||| || || ||||| || || | ||| |||||||| ||| ||| || ||| Sbjct 603924 CCCTCTACGGCGGCAAAGGCGATAATTCGCTCTCCAAAATTGGCTGACTTGGATGAGATC 603865 Query 14055 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14114 || ||||| || | || || | | ||| || || || ||||| || Sbjct 603864 CAGGAAAGCGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATCGTCTCGATGGCATTGAAC 603805 Query 14115 AAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14174 | || ||| || | | | | |||||||| || || || | ||||||||||| Sbjct 603804 AGGTACTCCCGCTGATGCGGATCTCGGATGTATGTGTCGATCAGGACACTATACATTTCG 603745 Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234 ||||| | ||||||||| || ||||| ||||| || ||||| | || || | || Sbjct 603744 GAGTGCACGTTTTCCATTGCGATCTGGAAACCGTAGAAGCAGCGTGCCTCAGTGATCTGA 603685 Query 14235 ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14294 || ||| | ||||| || ||| || || || || || ||||| ||| ||||| Sbjct 603684 ACCTCCTGGCTAAATCGCTCAACCAGGTTCTCGTTCACGATTCCATCGGAAGCGGCAAAG 603625 Query 14295 AATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGAT 14354 || |||| | || | || |||| |||| || | || || | ||| || | Sbjct 603624 AAGGCCAGCACGTGTGAGATGAAGTGACGCTCGTCGTCCTTTAGGCGATGCCAGTCCGTC 603565 Query 14355 AAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 | |||||| || ||||| ||||| || || ||||| || Sbjct 603564 AGATCCTTGGACAGATCCACTTCCTCCACAGTCCAGAA 603527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479698340816400