Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4471 140 3e-28 >seq4471 Length=3711889 Score = 140 bits (154), Expect = 3e-28 Identities = 344/520 (66%), Gaps = 4/520 (1%) Strand=Plus/Minus Query 13663 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13722 ||||| || || || | ||| || || | ||||||||||| || ||||| | || Sbjct 604044 GCAAAGTCGCAGTGCAAGCCTTCGTCCCGGGATATAAGTTCGTTGGAGAATGTCAGGCCC 603985 Query 13723 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 13782 ||||||| || ||||| |||| ||| || || | ||||| ||| |||||| || Sbjct 603984 GGCATCAGGCCACGTTTCTTTAGCCAGAAAATAGAGGCGAAGCTGCCGCTAAAGAAGATG 603925 Query 13783 CCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATC 13842 ||||| || || ||||| || || | ||| |||||||| ||| ||| ||| ||| Sbjct 603924 CCCTCTACGGCGGCAAAGGCGATAATTCGCTCTCCAAAATTGGCTGACTTGGATGAGATC 603865 Query 13843 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAAT 13902 || ||||| || | || || | | ||| || ||||| |||||||| Sbjct 603864 CAGGAAAGCGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATCGTCTCGATGGCATTGAAC 603805 Query 13903 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 13962 | | ||| || | | | | |||||||| || || || | ||||||||||| Sbjct 603804 AGGTACTCCCGCTGATGCGGATCTCGGATGTATGTGTCGATCAGGACACTATACATTTCG 603745 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATT 14020 ||||| | |||||| || || ||||| ||||| || || || | || || ||| | | Sbjct 603744 GAGTGCACGTTTTCCATTGCGATCTGGAAACCGTAGAAGCAGCGTGCCTCAGTGATC--T 603687 Query 14021 GTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAA 14080 | |||||| | ||||| || ||| ||| || || || || ||||| ||| |||| Sbjct 603686 GAACCTCCTGGCTAAATCGCTCAACCAGGTTCTCGTTCACGATTCCATCGGAAGCGGCAA 603627 Query 14081 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGG 14140 | || |||| | || | || |||| |||| || | || || | ||| || | Sbjct 603626 AGAAGGCCAGCACGTGTGAGATGAAGTGACGCTCGTCGTCCTTTAGGCGATGCCAGTCCG 603567 Query 14141 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 | |||||| || ||||| ||||| || || ||||| || Sbjct 603566 TCAGATCCTTGGACAGATCCACTTCCTCCACAGTCCAGAA 603527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478559211247440