Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq3235 293 1e-74 >seq3235 Length=24392 Score = 293 bits (324), Expect = 1e-74 Identities = 530/772 (69%), Gaps = 15/772 (2%) Strand=Plus/Plus Query 66679 GGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCC 66738 |||||| |||||||||| ||| | | ||||| ||||||||| || || || || Sbjct 4971 GGACGTGGTTCCCACCGGTTCTCTGGGGCTGGATATCGCTCTGGGGATTGGCGGCCTGCC 5030 Query 66739 GAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCT 66798 | | ||||| ||| | ||||| |||||||| ||| || || || | || ||| || Sbjct 5031 GCGTGGCCGTGTGATTGAAATTTACGGCCCGGAAAGCTCCGGTAAAACCACGCTGGCGCT 5090 Query 66799 CCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCA 66858 || || | || | || |||||| || |||| | ||||| || || || ||||| Sbjct 5091 GCATGCCATTGCAGAGGCCCAGAAGCGGGGGGGCACCTGCGCCTTTATTGATGCCGAGCA 5150 Query 66859 CTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT 66918 | | |||||||||| ||||||||| ||| || ||||| | || || || || | Sbjct 5151 CGCGCTGGACCCCGGCTACGCCAAGAAGCTGGGCGTGGATATTGATAATCTGCTGATCAG 5210 Query 66919 TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 66978 ||||| ||| | || |||||||| ||||| || | ||| || || ||||||| Sbjct 5211 CCAGCCCGACGCGGGTGAGCAGGCGCTGGAAATTGCGGACACACTGGTGCGCTCTGGCGC 5270 Query 66979 GCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGG 67038 | | | | || || ||| |||||||||||| |||||||| |||||||| ||||| Sbjct 5271 GATTGATGTGCTGGTGGTGGACAGTGTGGCGGCCCTTGTGCCGCGTGCCGAGCTTGAAGG 5330 Query 67039 CGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAA 67098 || || || ||||| || ||||||||||| || || || ||| ||||| ||||||| Sbjct 5331 GGATATGGGTGACAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCGCTGCGCAA 5390 Query 67099 GCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGA 67158 ||| || ||| || | | || ||||||| ||| | ||| | |||||| | || Sbjct 5391 GCTGACAGGCTCCGTTGCGCGCTCCAACACCATGATGATCTTCCTGAACCAGATCCGTCT 5450 Query 67159 GAAGATCGGC---AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTT 67215 ||| || ||| | | ||| | |||| || ||||| |||||||| || || | Sbjct 5451 GAAAATTGGCGTGATGTTTGGCAA---CCCG---GAAACCACGACGGGCGGGAACGCACT 5504 Query 67216 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 67275 || ||||| || || || || ||||| |||| ||||||| || ||||| || Sbjct 5505 GAAATTCTATGCTTCCGTGCGTCTGGATATCCGCCGCATCGGGTCCATCAAGGACAAGGA 5564 Query 67276 TGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCA 67335 ||||| || ||||||| || |||||||| || |||||||||||| ||||||||||| Sbjct 5565 TGAGGTGGTGGGCAACCAGACGCGGGTGAAGGTGGTCAAGAACAAGATGGCCCCGCCGTT 5624 Query 67336 CCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC---GAACT 67392 ||| | | |||||| || |||| || || || ||| | ||||| ||||| Sbjct 5625 CCGTCAGGTCGAGTTTGATATCATGTATGGCGAAGGTATC---AGCAAGGTCGGGGAACT 5681 Query 67393 CCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 67444 | || || | |||| || ||||| |||| || ||||| |||||| Sbjct 5682 GATTGATCTTGGCGTGAAAGCCGGTGTGGTGGAGAAATCCGGCGCATGGTTC 5733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242839760888552