Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq321 84.2 2e-11 >seq321 Length=36169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 99670 TCTGTAACCACGGGCTGGAGAAGGTGGGGGATACCGTTGTACGGGGTGAGCTCGA-CACA 99728 ||||| ||||| || || || || |||||||| | || || ||| || | ||| Sbjct 11973 TCTGTCACCACCGGGGTCAGCAGATGCGGGATACCATCATAAATGGAGAGTTCCAGCACC 11914 Query 99729 TTTGGGGTCGATCATGATGAGTTTGACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAAC 99788 || |||||| |||||||| || | ||| |||| ||||||||||||||| | Sbjct 11913 TT-GGGGTCAATCATGATCAGGCGGCATTCATCCGGGGAAAGCCGGTAGAGCAGCGAGAG 11855 Query 99789 CAGCATTGAGTTGATG--AAGCTGGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGA 99846 | ||| | ||| | | || | ||||| || || ||||| | |||||||||||||||| Sbjct 11854 GATCATGGCGTTCACGCCAACC--GACTTACCGGACCCGGTGGTGCCAGCCACCAGCAGA 11797 Query 99847 TGCGGCAT 99854 |||||||| Sbjct 11796 TGCGGCAT 11789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354621822329556