Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4042 95.1 1e-14 >seq4042 Length=640736 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||| |||| | | ||||| ||||| ||||||||||| || |||||||| || | | Sbjct 503609 CCTCCGCGCAGACGGAGCACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGAC 503668 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || ||||||||||||| || || || | || | | ||||||||| ||| Sbjct 503669 AAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGG 503728 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| ||||| || || || || | ||| || ||| |||||| | Sbjct 503729 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACT 503788 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | ||| ||||| || || || ||||| || || ||||||||||| || Sbjct 503789 TCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAAATTTGCATATT 503838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414547809810724