Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4042 93.3 3e-14 >seq4042 Length=640736 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 |||||||||||| || ||||| || || |||||||| || ||||| | || ||| || Sbjct 503626 CACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTC 503685 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC--- 33276 || ||||||||| || || ||||| ||||| || | ||| || || || || || Sbjct 503686 CAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 503745 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | | ||| || || | | || |||||| || | ||| |||| || || || Sbjct 503746 GATCTTGGCC---TTGACGTTCTCGATGGTGTCGGAAGGCTCAACTTCCAAGGTGATGGT 503802 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || || || | ||| || |||||||||||||| || Sbjct 503803 CTTGCCAGTCAAAGTCTTCACGAAAATTTGCATATT 503838 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/214 (70%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 |||||||||||| || ||||| || || |||||||| || ||||| | || ||| || Sbjct 503170 CACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTC 503229 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC--- 33276 || ||||||||| || || ||||| ||||| || | ||| || || || || || Sbjct 503230 CAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 503289 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | | ||| || || | | || |||||| || | ||| |||| ||| || || Sbjct 503290 GATCTTGGCC---TTAACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGT 503346 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||| || || || || || |||||| Sbjct 503347 CTTGCCGGTAAGGGTCTTCACAAAGATCTGCATG 503380 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| ||||||||||| || ||||| || || |||||||| || ||||| | || | Sbjct 502937 CGCAGGACCAAATGCAAAGTAGACTCCTTCTGAATATTGTAGTCGGACAAGGTACGTCCG 502996 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273 || |||| ||||||||| || || ||||| ||||| || | ||| || || || || Sbjct 502997 TCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTG 503056 Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | ||| || || | | || |||||| || | ||| |||| ||| Sbjct 503057 TCTTGGATCTTGGCC---TTGACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTG 503113 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || || || || || || || || || || |||||| Sbjct 503114 ATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 503152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318758384285508