Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq3246 111 2e-19 >seq3246 Length=21026 Score = 111 bits (122), Expect = 2e-19 Identities = 155/217 (71%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 6509 GCGATAACATGAAGAAGCGGGCCGCCTTGAATACCCGGGAAGATAGCAGAATTTACTTTC 6568 || ||||| || | ||||||||||| || | ||| ||||| | || ||||| | || Sbjct 490 GCAATAACGTGCATCAGCGGGCCGCCCTGCAGACCGGGGAAAACGGCGGAATTGATCTTT 431 Query 6569 TTGGCGATATCAGCATCGTTAGTAAGAATGAGGCCACCACGAGGGCCGCGCAAAGTTTTA 6628 ||||| | | ||||||| || || || || |||||||| ||||| |||| |||||| Sbjct 430 TTGGCCAGTGCTTCATCGTTGGTCAGGATCAGCCCACCACGCGGGCCACGCAGCGTTTTA 371 Query 6629 TGAGTTGTAGTAGTAACAACGTCGGCACCCCATTTGAGTGGATTAGCGTGAAGACGAGCA 6688 || || || | || || || | || | | || || |||| || || | |||| Sbjct 370 TGCGTGGTGGACGTCACCACATGCGCGTGC---TCAAGCGGGTTAGGGTAGAGGCCAGCA 314 Query 6689 GCAACAAAGCCAGCAAAATGGGCCATATCGACCATCA 6725 || || | |||||||||||||||||||| ||||||| Sbjct 313 GCCACCAGACCAGCAAAATGGGCCATATCCACCATCA 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555328864670160