Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq3383 87.8 3e-12 seq321 86.0 9e-12 seq1074 84.2 3e-11 >seq3383 Length=12283 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369 ||||| || ||||||| || |||| ||||||||||||||||||||||||| || |||||| Sbjct 340 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCAGTGTCCTAGGCCTCTAGAC 399 Query 108370 GAACGG 108375 |||||| Sbjct 400 GAACGG 405 >seq321 Length=36169 Score = 86.0 bits (94), Expect = 9e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070 ||| ||||||| || | |||||| || ||||||| ||||||||||| |||||||||||| Sbjct 22852 TGGTGCCCCCATTCAGATTTGAACTGAAGACCTACCGCTTACAAGGCGGTTGCTCTACCA 22793 Query 108071 CTGAGCTATA 108080 |||||||||| Sbjct 22792 CTGAGCTATA 22783 >seq1074 Length=6950 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369 ||||| || ||||||| || |||| ||||||||||||||||||||||| | || |||||| Sbjct 1503 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCAGTGTCCTTGGCCTCTAGAC 1562 Query 108370 GAACGG 108375 |||||| Sbjct 1563 GAACGG 1568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746174664899040