Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq2267 87.8 1e-12 >seq2267 Length=1036559 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 75003 GTGGTCCCCTCCTTTGGCAGGGCCCTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCG 75062 || ||||| ||| || | |||| | || |||||||||||| || | | || | Sbjct 445788 GTTGTCCCGTCCCGAGGAAAGGCCATTGTGAAGACAGACCTGCAGGTGCAAGTTCCGGAG 445847 Query 75063 GGCCTCTACGGCAGGGTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTC 75122 || |||||| | || || || | ||||| |||||| |||| || ||||| || || Sbjct 445848 GGTTCCTACGGACGCGTTGCCCCACGATCCGGACTGGCCGTGAAGAACTTTATCGATGTG 445907 Query 75123 GGTGCCGGGGTGGTGGACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAA--CT 75180 || ||||| ||||||||| || ||| | || ||||| |||||| | ||||||| | Sbjct 445908 GGCGCCGGCGTGGTGGACGAGGATTACCGCGGTAACCTTGGCGTCGTTTTGTTTAATCAT 445967 Query 75181 TTGGGTG-CGACCCCTTTCG-GGTCAAGAGGGGCGACAGGATAGCCCAGCTC 75230 | || || ||| ||||| || ||| |||| ||| | || |||||| || Sbjct 445968 TCGGATGTCGA----TTTCGAAGTAAAGCGGGGTGACCGCATTGCCCAGTTC 446015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338744379469584