Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4681 150 2e-31 seq4563 136 4e-27 seq4471 87.8 2e-12 >seq4681 Length=7884553 Score = 150 bits (166), Expect = 2e-31 Identities = 139/176 (79%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| || || ||||| | || |||||||||||||| ||||| ||||||||||||||| Sbjct 5741649 GAGGGCAAGATGCACGGCTTTCTGCGCATGTACTGGGCAAAAAAAATTCTCGAGTGGACT 5741708 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 ||||| || ||||||| |||||| | || | |||||||||| ||||| ||||| Sbjct 5741709 GCCACTCCTGAAGAGGCGCTGGAGTATGCGATATTACTAAACGATAAGTACAGCCTCGAT 5741768 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGA 71892 || || || |||||||||||||| || || |||||| ||| ||||| | ||||| Sbjct 5741769 GGACGTGACCCTAACGGTTATGTTGGGTGTATGTGGTCTATTGGCGGTGTGCACGA 5741824 >seq4563 Length=5383265 Score = 136 bits (150), Expect = 4e-27 Identities = 352/522 (67%), Gaps = 31/522 (6%) Strand=Plus/Minus Query 147449 ATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTC--GTACGTACAAATTACTA 147506 ||| || || ||||| || | ||||| ||||||||||||| ||| || | |||| || Sbjct 4594630 ATGATGGTTAACCACCTGGAATTCGCCAGACAGAACTCTTCTGGTA--TAAATATTAGTA 4594573 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 ||| |||||||||| || |||||||| || | |||||| ||||| | ||| || ||||| Sbjct 4594572 GTATACGGCTCGAAAGATTCGTTGTTGCCCATAATCTGAGCAGTAGATGCTGTTGGCATA 4594513 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCG----CTTAAGCTC 147622 ||||| || | || || || | |||||| | ||| ||| ||| |||| Sbjct 4594512 GGAGCAACCAGCAGGGAGTTCCGGACACCGTGCTT----CTTTATCGACTCCTTTAGCTT 4594457 Query 147623 GTCCCAGTTCCAAAGATCATTCGATTGG---TTAATATTCCACAAATCAAACTGTAAAAG 147679 | ||||| ||| || |||| | || || | | ||||| || |||| |||| Sbjct 4594456 TTGCCAGTCCCAGAG---GTTCG-TCGGAACTT--TGTCCCACATGTCGTACTGCAAAAT 4594403 Query 147680 TCCACAACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTC 147739 ||| ||| | |||||||| || |||| ||||||| || | | | ||||| ||| Sbjct 4594402 TCCTTTGCTTACCGGGCTTCCCTCATAAGTTTCGTATGGGCCTTCGATCTGAGCTAATTC 4594343 Query 147740 GATACTTTGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCT 147797 || || ||| | || ||||| ||||| ||||| | |||| | ||| || Sbjct 4594342 ACAAC--TGGCTTCCAAAGCCCCATAGTAAATCGTTTCGAATATCTGCTGATTCAAGAGG 4594285 Query 147798 CTAGCCTCTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTG 147856 || || || | || || || || | ||| || | || | ||| |||| || || Sbjct 4594284 CTCGCTTCATCACTTTCATATGGGA-ATCGCATGAGAATTAATGCATCAGCAAAGCCCTG 4594226 Query 147857 AATACCGATACCGATGGGTCGGTGTCTGAAATTCGA--TGCTTGAGCGCTAGCCAACGGA 147914 || ||||| || | ||| || || || ||||| || | |||| | || | || |||| Sbjct 4594225 AACTCCGATGCCCACGGGGCGATGCCTCAAATTGGACTTCCTTG-CCTCT-GGCAGCGGA 4594168 Query 147915 TAAAAATTCAAGTCGATAATTTTATTGAGATTATTGGTAACC 147956 ||||| || | ||||| || || |||||||| |||||||| Sbjct 4594167 TAAAAGTTGATATCGATTATCTTGTTGAGATTTCTGGTAACC 4594126 >seq4471 Length=3711889 Score = 87.8 bits (96), Expect = 2e-12 Identities = 170/246 (69%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 119626 TGGCCGCTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT 119685 ||||| |||| | |||| |||||||||||| || || || || || ||||| || | Sbjct 604352 TGGCCACTCCCATACGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTTGTCTTTCCGT 604293 Query 119686 CAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGC 119745 | || || || | | ||| || | |||||| || |||||| | ||| || | Sbjct 604292 CCAGCGAGATCATCTCCATGAAATTGAAAGGGTTCTTGGTGTTGTAGATCTT-TCCAACA 604234 Query 119746 CCAA-CTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGA 119803 |||| ||| | || || || ||||| |||||||||||||| | | |||| | | || | Sbjct 604233 CCAAGCTCCACCAGCAAACGGTCTGCGACAAACTCGATGTACTGGGACATCAGGTCGC-A 604175 Query 119804 ATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGAC 119863 ||||||||| | || || || | |||| |||| ||| |||| |||||| | || Sbjct 604174 ATTCATGCCGATCAAGTTTACGGGAAGGGCATCTGTAAGGAACTCCTGCTCAATGGCCAC 604115 Query 119864 CGCTTC 119869 ||| || Sbjct 604114 CGCGTC 604109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478632806697120