Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4563 242 1e-58 >seq4563 Length=5383265 Score = 242 bits (268), Expect = 1e-58 Identities = 1111/1745 (64%), Gaps = 39/1745 (2%) Strand=Plus/Plus Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 || ||| | || | |||||| ||||| |||||||| ||||| ||||| || || ||||| Sbjct 4593188 AACGGTAAGATCGCTGAACGGCCGCAACATATGTTGATGCGCGTTGCGATCGGAATCCAC 4593247 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCAC 363551 | ||| | || || || | ||||| ||||| ||| | | || ||| ||||| Sbjct 4593248 GGGGAAGATATCGACGCGGCCGTAGAAACGTATAATCTTTTGTCAGAGCG-GTACTTCAC 4593306 Query 363552 GCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC---CACAGATGTCTTCTTG 363608 || || | ||||| | | ||| | | | |||| | ||| | ||||| || Sbjct 4593307 TCATGCATCACCAACGCTTTT---TGCAGCAGCCACAAATCGGCCGCAGCTATCTTCATG 4593363 Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 || ||| ||| |||| | ||| |||||||| || || ||| | | | || | || Sbjct 4593364 TTTCCTTTTAACCATGACAGCCGACTCCATCGAAGGCATTTTTAAGTCTGTGGAGCAATG 4593423 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA 363728 ||| | ||||| || ||| || || ||||| || | || | | || ||| | Sbjct 4593424 TGCCATGATTTCTAAATCTGCTGGTGGCATTGGACTAAATGTTCATTGTATCCGAGCAAA 4593483 Query 363729 GAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGT 363788 | | || || |||| ||| ||| || ||||| |||||||||||||| | || Sbjct 4593484 GGGTACTTCGATATGCGGAACAAATGGAACTTCCAATGGACTGGTTCCCATGCTGAGGGT 4593543 Query 363789 GTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGC 363848 || | || |||| | || || || ||||| || || ||||| ||| || ||||| Sbjct 4593544 CTTCAATAACGTTGCGCGTTATGTGGATCAGGGAGGCGGCAAGCGTCCAGGAGCCTTTGC 4593603 Query 363849 TATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC 363908 ||| || || ||||| || | ||| | ||||| ||||| || ||| ||||||||| Sbjct 4593604 TATTTACCTGGAGCCCTGGCACTCTGATGTCTTTGAATTTCTGGAACTCAAGAAAAACAC 4593663 Query 363909 GGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTT 363968 || || || || || || || ||||| || || || | ||| | |||| | ||| Sbjct 4593664 TGGCAAGGAAGAGAATCGCGCCCGAGATCTTTTTTACGCCTTGTGGATACCTGATCTTTT 4593723 Query 363969 TATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGG 364028 ||||| || || ||||| | ||||||| || | ||||| ||| |||| || || Sbjct 4593724 CATGAAACGTGTAGAGGCCAATGGAGATTGGTCCCTTATGTGCCCGCACAAATGCCCTGG 4593783 Query 364029 TCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG 364088 ||| |||||||||||| || || | || |||| | || ||||| ||||| Sbjct 4593784 CCTTCACGATGTATGGGGCGATGAATTTGAAAAGTTATATGTGAAATATGAGCAAGAGGG 4593843 Query 364089 AAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGAT 364148 || ||| || || || ||||||| ||||| || || | || | Sbjct 4593844 CCGTGCCAACCGAACAGTTAAGGCTCAATCCTTATGGTTCGCCATTATTGAAGCACAAGT 4593903 Query 364149 TGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208 || || |||| || |||||| | | ||| ||| | |||||| | ||| |||||||| Sbjct 4593904 GGAAACTGGAAATCCGTATATGCTCTTCAAGGATGCCTGCAACAGGAAGAGTAACCAGCA 4593963 Query 364209 GCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 | | |||| || ||| | || ||| | || || || ||| | || ||| || | || Sbjct 4593964 GAATGTTGGCACCATTAAATGCAGTAACTTGTGCACAGAAATTGTCGAGTACTCCTCCCC 4594023 Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA---GA 364325 || |||| ||| || |||||| | || || || || ||| |||||| | | || Sbjct 4594024 GGATGAGATTGCAGTTTGTAACTTGGCATCCATTGCTCTTAACATGTTTGTCACACCGGA 4594083 Query 364326 TGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385 || | || | | | || | || || ||| | | ||| | |||||| | Sbjct 4594084 AAAGACATACGATTTCAAAAAACTAAAGGAAGTCACCAAGACGGTTACCAGAAATCTCAA 4594143 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445 |||| | ||||| | || | |||||| | || || || | || ||| || | || Sbjct 4594144 CAAGATAATCGATATCAACTTTTATCCGCTGCCAGAGGCAAGGAAGTCCAATTTGAGGCA 4594203 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG---AT 364502 |||||| | || | || || |||||| | ||||| | | | || |||| | | Sbjct 4594204 TCGCCCCGTGGGCATCGGAGTTCAGGGCTTTGCTGATGCAT---TAATTCTCATGCGATT 4594260 Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562 ||| ||| ||| || | | | ||| || |||| || ||||| || || | Sbjct 4594261 CCCATATGAAAGTGATGAAGCGAGCCTCTTGAATCAGCAGATATTCGAAACGATTTACTA 4594320 Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622 || || || || ||||| || || | | | | || ||| |||||||| Sbjct 4594321 TGGGGCTTTGGAAGCCAGTTGTGAATTAGCTCAGATCGAAGGCCCATACGAAACTTATGA 4594380 Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG---AATGTCACGCCATC 364679 ||| ||| | | |||| || |||| || | ||| || || || | Sbjct 4594381 GGGAAGCCCGGTAAGCAAAGGAATTTTGCAGTACGACATGTGGGACAAAGT---TCCGAC 4594437 Query 364680 TGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC 364737 || ||| ||||| | | ||| | | | | | |||||||| ||| || ||| Sbjct 4594438 GAACCTCTGGGACTGGCAAAAGCTAAAGGAGTCGA--TAAAGAAGCACGGTGTCCGGAAC 4594495 Query 364738 TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAG 364797 ||||| | || || ||||| || || |||||||| ||||| | || |||||||| Sbjct 4594496 TCCCTGCTGGTTGCTCCTATGCCAACAGCATCTACTGCTCAGATTATGGGCAACAACGAA 4594555 Query 364798 TGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCG 364857 | ||||| |||| ||| | ||| ||||| | | | ||||| || || ||||| | | Sbjct 4594556 TCTTTCGAGCCGTATACTACTAATATTTATACCAGAAGAGTTCTGTCTGGCGAATTCCAG 4594615 Query 364858 GTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATG 364917 || ||||| | | | | | ||| | | || | | |||||| || |||| Sbjct 4594616 GTGGTTAACCATCATTTGTTGAGGGACTTGACTGAGCTGGACTTGTGGGACGATGACATG 4594675 Query 364918 AAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT-CCAGGATTTC-CAGAAG 364975 |||||| | ||||| || | ||||| | || || ||| | ||| | |||||| Sbjct 4594676 AAGAACCAAATCATTTCCAGCAGGGGTTCAATTCAAAATATTGAGACTATTCCACAGAAG 4594735 Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC--TCATTGATAT 365033 | | || ||||||||||||| |||||||| || || ||| || ||| | || Sbjct 4594736 GTTCGTGACC--TTTACAAAACCGTTTGGGAAATCTC--TGTGAAGTCCACAATTAAAAT 4594791 Query 365034 GGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG--ACT 365091 ||| || ||||| ||||| ||||| |||||| ||||| ||||| ||| |||| | Sbjct 4594792 GGCCGCTGATCGTGGTGCGTTTATAGATCAGAGTCAGTCCTTTAA--TATACATGTAGCA 4594849 Query 365092 CAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAG 365151 |||||| || | || || || ||||| || || ||| |||||| | || || || Sbjct 4594850 GAGCCAAACTATGGAAAACTGACGTCCATACACTTTTACTCCTGGAAAGCTGGGCTCAAA 4594909 Query 365152 ACAGG 365156 || || Sbjct 4594910 ACCGG 4594914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303271005667772