Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4807 120 3e-22 seq4240 114 1e-20 >seq4807 Length=1189310 Score = 120 bits (132), Expect = 3e-22 Identities = 81/90 (90%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 |||||||||||||||||| |||||||||||||||||||||| |||||||| | | || Sbjct 297696 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGA 297637 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||| |||||||| Sbjct 297636 GCGTGGGTTCGAACCCCACACTTGACAAAT 297607 Score = 104 bits (114), Expect = 3e-17 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321 ||| ||||||||||||| ||||||||||||| |||||||| |||||||| | | ||| Sbjct 451945 CAGCCAGGTTGGCCGAGCGGTCTAAGGCGCCCGATTTAAGCTCTGGTTCTCGAGAGAGAG 451886 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||| || Sbjct 451885 CGTGGGTTCGAACCCCACACCTGGCA 451860 >seq4240 Length=976885 Score = 114 bits (126), Expect = 1e-20 Identities = 80/90 (89%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 |||| ||||||||||||| |||||||||||||||||||||| |||||||| | | || Sbjct 33619 ACAGCCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGTGAGAGA 33560 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||||||||||| ||||| Sbjct 33559 GCGTGGGTTCGAACCCCACACCTGGCAAAT 33530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556826372081040