Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4563 176 4e-39 >seq4563 Length=5383265 Score = 176 bits (194), Expect = 4e-39 Identities = 457/687 (67%), Gaps = 26/687 (4%) Strand=Plus/Minus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTG-TA 20193 |||||||| ||||| || || ||||||| | || ||||||| ||| ||| | || Sbjct 3137486 GGAAAGGGTCGTGGTGTACGTTCCAGCTGCTCCTTAAGGGGCTCTACATG-GTTCAGATA 3137428 Query 20194 GATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGC 20253 || ||| | || |||| ||||| | ||| || || || | ||||| || ||||| || Sbjct 3137427 GACGTGTGTGTCGCCCATGGTGTGCACAAAGTCGCCCGGCTTCAGACCCGTCACATGGGC 3137368 Query 20254 AAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTC 20313 | ||| || || | ||||| ||| ||| ||||| || || || ||||| |||||||| Sbjct 3137367 GATCATGTAGGTAAGGAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATGTC 3137308 Query 20314 TCCCGACCTCTGATACAGCTGACAGGAAAGCTCA--------CCGTCAGCTACATAAAAT 20365 | ||| || || ||||| || ||||||||| | || || || || || Sbjct 3137307 GGCGCTCCTTTGGTAGAGCTGGCACGAAAGCTCATTTCGGGTCTGTGAG--ACGTAGAAC 3137250 Query 20366 TGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCA 20425 || | |||| || |||||||| |||||| | | |||| || |||||||| Sbjct 3137249 TGCGCCAGGCAGTGGCACGGCGGAAGAGCCATCTTTGGAATGTCCAATGGATTCCACGCT 3137190 Query 20426 CACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCA-CAATGTACGACAA 20484 |||||||||| | || || || ||||| || || || | || | ||| ||| Sbjct 3137189 GACATAATGATACGCCTGTCCGAAGGGTTATTCTTAATGGTGTCGATCACTTGACG-CAA 3137131 Query 20485 TTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTG 20544 |||||| | |||| ||| | ||| || | || | | ||||| |||| |||||||| Sbjct 3137130 TTGGTCGATGCCCTTGCCGGCATAATCGTCTTCGCAGCTCCCGTACTCCGCACCAAAGTG 3137071 Query 20545 CCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC-----CTCCCTTCTGTGCGCCAGG 20599 || ||||||||| ||||| || || ||||| || || ||| || ||||| | | Sbjct 3137070 CCGCCACTGGAATCCGTACACCGGACCCAAGTCGCCAACGGCTCGCT-CTGTGTGAC--- 3137015 Query 20600 CCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC-TCCTGTTCT 20658 | || | ||| ||||||||||| || || ||||| || | || | || | Sbjct 3137014 -CCAGCTTGTCCAAGAACTCCCTGGTGCTGTTCCCATCCCAGATATGCACGTTCTTCGCC 3136956 Query 20659 TGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCC 20718 || | || | ||| ||| || | ||| || |||||| || ||||| | | || | Sbjct 3136955 TGCA-GCAGCTTGGCGTCTGTCTTGCCCGCCACAAACCAGAGTAGCTCCTCGGCCACAGC 3136897 Query 20719 TCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGCAGACTATACCTGGC 20778 || | || || ||||||||||||| || |||||| |||| || | | | Sbjct 3136896 GCGGAAGAAGACGCGCTTTGTGGTTAATAGGGGAAAAGACTCCCTCATGTTGAAACGCAT 3136837 Query 20779 CTGCATGCCAAATAGAGAGAGGGTGCC 20805 ||| ||||||||| ||| || ||||| Sbjct 3136836 CTGACTGCCAAATACAGACAGCGTGCC 3136810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441345512126640