Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4563 143 6e-29 seq4475 138 3e-27 >seq4563 Length=5383265 Score = 143 bits (158), Expect = 6e-29 Identities = 149/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || ||||||||||| | ||| ||||| || ||||| | || || || |||||| Sbjct 4507177 TCTTTCTGAATATTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 4507236 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||||||||| ||||| || || ||||| || Sbjct 4507237 ATCAGACGCTGCTG---ATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 4507293 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| |||| ||| | ||| || || || ||||| ||||| || || || ||||| Sbjct 4507294 TTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTA 4507353 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4507354 ACGAAGATCTGCAT 4507367 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || |||||||| || || | || || || |||||| Sbjct 1837991 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAG 1838050 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||||||| || || || || || |||||||| || ||||| Sbjct 1838051 ATCAGACGCTGCTG---ATCTGGGGGAATGCCCTCCTTGTCTTGGATTTTAGCCTTCACA 1838107 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || || | ||||| ||||| ||||| || || || Sbjct 1838108 TTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTC 1838167 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 1838168 ACGAAGATTTGCAT 1838181 >seq4475 Length=5362458 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| |||||||| | || || | |||| ||| || || ||||| || ||||||| Sbjct 1656473 TCCTCCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1656532 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 || |||||||| ||||| | || ||||| ||||||||||||||||| || ||| Sbjct 1656533 CAGTGTGCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GTCTGG 1656589 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || || |||||||| || || ||||| || || || | ||| | || Sbjct 1656590 AGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTC 1656649 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 1656650 CACTTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1656700 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || ||||| || ||||| | || || || |||||| Sbjct 1656738 TCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAG 1656797 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| ||||| || || || || ||||| || || ||||| Sbjct 1656798 ATCAGACGCTGCTG---ATCTGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTCACA 1656854 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || || || ||||| ||||| || |||| ||||| Sbjct 1656855 TTCTCAATGGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTCTTTCCAGTCAAGGTCTTC 1656914 Query 288460 ACGAATATCTGCATTATG--TTATTCT 288484 || || ||||||||| || ||||||| Sbjct 1656915 ACAAAGATCTGCATTTTGGATTATTCT 1656941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179579644563388