Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4042 116 4e-21 seq4475 104 3e-17 seq4563 96.9 4e-15 seq4889 84.2 2e-11 seq4720 84.2 2e-11 seq4716 84.2 2e-11 seq4701 84.2 2e-11 seq4537 84.2 2e-11 seq4014 84.2 2e-11 seq4470 82.4 8e-11 >seq4042 Length=640736 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | || ||||| ||||||||||| || |||||| ||||||||||| || | | Sbjct 502925 CCACCGCGTAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGAATATTGTAGTCGGAC 502984 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| || |||||||| |||||||| || | |||||||| || | || Sbjct 502985 AAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGG 503044 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| ||| || |||| || | | |||||| | || || Sbjct 503045 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACC 503104 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 503105 TCCAAAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 503151 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | |||||||||||| || |||||| || |||||||| || | | Sbjct 503153 CCTCCGCGCAGACGGAGCACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGAC 503212 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| || |||||||| |||||||| || | |||||||| || | || Sbjct 503213 AAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGG 503272 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||||| ||| || || | || | | |||||| | || || Sbjct 503273 ATTCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCGGAAGGCTCAACC 503332 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 503333 TCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 503379 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | |||||||||||| || |||||| || |||||||| || | | Sbjct 503609 CCTCCGCGCAGACGGAGCACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGAC 503668 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| || |||||||| |||||||| || | |||||||| || | || Sbjct 503669 AAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGG 503728 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||||| ||| || |||| || | | |||||| | || || Sbjct 503729 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACT 503788 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | |||||||| ||||| || | ||||| || || |||||||| || Sbjct 503789 TCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAAATTTGCATATT 503838 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||||||||| || ||||| || |||||||| || | || || || |||| || Sbjct 503399 ACCAAATGCAAAGTAGATTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCC 503458 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| || | |||||||| || | || | | |||||||||| | Sbjct 503459 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 503518 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || |||| || | | |||||| | || || || | |||||||| ||| Sbjct 503519 ATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTG 503578 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| |||||||| ||||| Sbjct 503579 CCGGTGAGGGTCTTCACAAAGATCTGCAT 503607 >seq4475 Length=5362458 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | |||||| || | ||| |||||| || || ||||| || | | Sbjct 1656474 CCTCCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1656533 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| || ||||| || || ||||||||||| | || Sbjct 1656534 AGTGTGCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGG 1656593 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||||| ||| || || | || | | |||||| | ||||| Sbjct 1656594 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACT 1656653 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 1656654 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1656700 >seq4563 Length=5383265 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || || ||||| || | |||||| || | Sbjct 1837966 ACGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCC 1838025 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| || || |||||||| || | || | || |||||| Sbjct 1838026 ATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTT 1838085 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| |||||| || | || | | ||||| | ||||| || | ||||| Sbjct 1838086 GTCTTGGATTTTAGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGAT 1838145 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || || || || ||||||||||| Sbjct 1838146 GGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1838181 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 836577 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 836636 Query 57065 TATACTACCGAGGA-TTGA 57082 ||||||| |||||| |||| Sbjct 836637 TATACTATCGAGGACTTGA 836655 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 831681 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 831622 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 831621 TATACTATCGAGGA 831608 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 905472 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 905531 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 905532 ATACTATCGAGGAT 905545 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 990379 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 990438 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 990439 ATACTATCGAGGAT 990452 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 990676 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 990617 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 990616 ATACTATCGAGGAT 990603 >seq4889 Length=666116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 103978 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 103919 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 103918 TATACTATCGAGGA 103905 >seq4720 Length=6167446 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3061108 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3061049 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 3061048 ATACTATCGAGGAT 3061035 >seq4716 Length=454550 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 182177 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 182118 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 182117 ATACTATCGAGGAT 182104 >seq4701 Length=918257 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 || ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 661312 TTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 661253 Query 57063 ACTATACTACCGAGGA 57078 ||||||||| |||||| Sbjct 661252 ACTATACTATCGAGGA 661237 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 661494 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 661553 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 661554 ATACTATCGAGGA 661566 >seq4537 Length=816816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 152847 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 152906 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 152907 TATACTATCGAGGA 152920 >seq4014 Length=1374326 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1130943 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1131002 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1131003 ATACTATCGAGGAT 1131016 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1130607 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1130548 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 1130547 ATACTATCGAGGA 1130535 >seq4470 Length=616862 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 501849 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 501790 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 501789 ATACTATCGAGGA 501777 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 502106 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 502165 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 502166 ATACTATCGAGGA 502178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543179215868640