Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq3235 262 2e-65 >seq3235 Length=24392 Score = 262 bits (290), Expect = 2e-65 Identities = 474/691 (69%), Gaps = 9/691 (1%) Strand=Plus/Plus Query 65914 TTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCC 65973 |||||||||| || | | ||||| |||||| || || || || ||| | |||| Sbjct 4979 TTCCCACCGGTTCTCTGGGGCTGGATATCGCTCTGGGGATTGGCGGCCTGCCGCGTGGCC 5038 Query 65974 GGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGG 66033 | || | || || ||||| || || || || || | ||| || || || || Sbjct 5039 GTGTGATTGAAATTTACGGCCCGGAAAGCTCCGGTAAAACCACGCTGGCGCTGCATGCCA 5098 Query 66034 TGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCG 66093 | || | ||||||||| || |||| | ||||| || || ||||| || | || | Sbjct 5099 TTGCAGAGGCCCAGAAGCGGGGGGGCACCTGCGCCTTTATTGATGCCGAGCACGCGCTGG 5158 Query 66094 ACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAG 66153 |||| | |||||| | ||| || |||||| | || ||||| || | ||||| | Sbjct 5159 ACCCCGGCTACGCCAAGAAGCTGGGCGTGGATATTGATAATCTGCTGATCAGCCAGCCCG 5218 Query 66154 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCA 66213 || | || |||||||| ||||| || | ||| || || ||||||| | || Sbjct 5219 ACGCGGGTGAGCAGGCGCTGGAAATTGCGGACACACTGGTGCGCTCTGGCGCGATTGATG 5278 Query 66214 TCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCG 66273 | | || |||||| |||||||||||| |||||||| || ||||| |||||||| || | Sbjct 5279 TGCTGGTGGTGGACAGTGTGGCGGCCCTTGTGCCGCGTGCCGAGCTTGAAGGGGATATGG 5338 Query 66274 GGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCG 66333 | ||| || ||||||||||||||||| |||||| |||||| ||||||||||||| | Sbjct 5339 GTGACAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCGCTGCGCAAGCTGACAG 5398 Query 66334 GCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCG 66393 || | |||| || ||||||| | | | | |||| ||| | || ||| || | Sbjct 5399 GCTCCGTTGCGCGCTCCAACACCATGATGATCTTCCTGAACCAGATCCGTCTGAAAATTG 5458 Query 66394 GC---AACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCT 66450 || | | ||| | |||| || ||||| || || || || || ||| |||| Sbjct 5459 GCGTGATGTTTGGCAA---CCCG---GAAACCACGACGGGCGGGAACGCACTGAAATTCT 5512 Query 66451 ACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTG 66510 | || || |||||| ||||| ||||| | |||| || ||||| ||||||| | Sbjct 5513 ATGCTTCCGTGCGTCTGGATATCCGCCGCATCGGGTCCATCAAGGACAAGGATGAGGTGG 5572 Query 66511 TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGG 66570 | ||||||| ||||| |||||||| |||||||||||| |||| || ||| ||| |||| Sbjct 5573 TGGGCAACCAGACGCGGGTGAAGGTGGTCAAGAACAAGATGGCCCCGCCGTTCCGTCAGG 5632 Query 66571 CTGAGTTTTCCATCGTCTACGGCGAGGGCAT 66601 |||||| ||| | || ||||| || || Sbjct 5633 TCGAGTTTGATATCATGTATGGCGAAGGTAT 5663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242455784035832