Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4563 102 8e-17 >seq4563 Length=5383265 Score = 102 bits (112), Expect = 8e-17 Identities = 261/395 (66%), Gaps = 2/395 (1%) Strand=Plus/Plus Query 93927 GCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTT 93986 ||| ||| | ||||| |||||||| | || | | |||||||||||| || ||||| Sbjct 4593346 GCCGCAGCTATCTTCATGTTTCCTTTTAACCATGACAGCCGACTCCATCGAAGGCATTTT 4593405 Query 93987 CGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGT 94046 | | || | ||||| | || || |||| || || || || || | | ||| Sbjct 4593406 TAAGTCTGTGGAGCAATGTGCCATGATTTCTAAATCTGCTGGTGGCATTGGACTAAATGT 4593465 Query 94047 CCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCT 94106 || | || || | |||| | | || |||| || ||||| || ||||| || || Sbjct 4593466 TCATTGTATCCGAGCAAAGGGTACTTCGATATGCGGAACAAATGGAACTTCCAATGGACT 4593525 Query 94107 CGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAG 94166 || || ||||| |||||||||| |||| ||||| || ||||| ||||| || || | Sbjct 4593526 GGTTCCCATGCTGAGGGTCTTCAATAACGTTGCGCGTTATGTGGATCAGGGAGGCGGCAA 4593585 Query 94167 GAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCAT 94226 | | || | || || | || || |||||||||||| | || || | || | Sbjct 4593586 GCGTCCAGGAGCCTTTGCTATTTACCTGGAGCCCTGGCACTCTGATGTCTTTGAATTTCT 4593645 Query 94227 CGACCTGCGAAAGAACCAC-GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTC 94285 || || | | | || ||| ||||| || | | | ||| |||| || || ||||| Sbjct 4593646 GGAACT-CAAGAAAAACACTGGCAAGGAAGAGAATCGCGCCCGAGATCTTTTTTACGCCT 4593704 Query 94286 TCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 | ||| | || || ||||| |||||||| || ||| Sbjct 4593705 TGTGGATACCTGATCTTTTCATGAAACGTGTAGAG 4593739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494692613738160