Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq4042 84.2 2e-11 seq4563 82.4 5e-11 >seq4042 Length=640736 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || ||||| | ||||| || || || || ||||| ||| || || || |||| | Sbjct 503627 ACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCG--GACAAGGTACGTCCGTCCT 503684 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | || || |||||| | ||||||||||| || || || ||||| |||||||| Sbjct 503685 CCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCT 503744 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || ||| || || | || || || ||| | || || || ||||| ||||| | Sbjct 503745 GGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTCT 503804 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 | || |||| ||| || || |||||||||||||| Sbjct 503805 TGCCAGTCAAAGTCTTCACGAAAATTTGCATATT 503838 >seq4563 Length=5383265 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| | || ||||||||| | |||| |||||| || || ||||||||||| ||| Sbjct 4507213 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 4507272 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || ||| ||| ||| ||| |||| |||||||| | ||| || || | || ||| Sbjct 4507273 TCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATG 4507332 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || || || || || || || || ||||| || Sbjct 4507333 GTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATGTT 4507370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357370456633610