Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq4681 89.7 4e-13 >seq4681 Length=7884553 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/188 (71%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 69541 tgtttttcttttACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACCATTTATT 69600 |||||||||| ||| || | || | ||| ||| |||| ||| ||| || | |||| Sbjct 1543668 TGTTTTTCTT---CCGTGAGCTTTCCATGGAGTTTATGAACTTCGGCAAGGCCGTCTATT 1543724 Query 69601 CGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTACTCGGATAAAT 69660 || | || ||| | || || ||||| || | ||||| || || || | | | Sbjct 1543725 CGCGCGTTGCTAGGGTTTGTAAAAACGACCGTGGCGGACCCTATAACCACGGCAAGAGCT 1543784 Query 69661 GGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCCTTTTACT 69720 |||| || ||| | ||||| || || || || ||||||||||||||||| ||||| |||| Sbjct 1543785 GGACCTCCTTTCTTAAGACCCGCCTGAACTGCTCGGTGCCCGGCGAATTTCCCTTCTACT 1543844 Query 69721 TTGACGAA 69728 | |||||| Sbjct 1543845 TCGACGAA 1543852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408218591355056