Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_012884.1 Length=31147 Score E Sequences producing significant alignments: (Bits) Value seq1551 100 6e-17 >seq1551 Length=1910 Score = 100 bits (110), Expect = 6e-17 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 28497 ACTTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGAT 28556 |||||||| || || ||| ||||| ||| | ||| |||||||| || |||||||| Sbjct 1826 ACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGAC 1767 Query 28557 TTCATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAA 28616 ||| | || || |||||||| | ||||||||| || || |||| | | || Sbjct 1766 TTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAG 1707 Query 28617 GGGACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGT 28676 || | ||| | || || ||||| ||||||||||| ||||| || ||| | || || Sbjct 1706 GGTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGC 1647 Query 28677 CAGCGTGTTTACGTCACAGAAGTTGTTG 28704 || || ||||| || || ||||| |||| Sbjct 1646 CAACGAGTTTATGTTACCGAAGTAGTTG 1619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99542953125668