Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4563 114 2e-20 seq4471 111 2e-19 seq4472 109 7e-19 >seq4563 Length=5383265 Score = 114 bits (126), Expect = 2e-20 Identities = 443/692 (64%), Gaps = 17/692 (2%) Strand=Plus/Minus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 ||| || || || || || ||||| || | || ||||| |||| || || || || || Sbjct 4594585 ATAAATATTAGTAGTATACGGCTCGAAAGATTCGTTGTTGCCCATAATCTGAGCAGTAGA 4594526 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021 ||||| ||||| || || | || ||| ||| |||| ||| | | | || || Sbjct 4594525 TGCTGTTGGCATAGGAGCAACCAGCAGGGAGTTCCGGACACCGTGCTTCTTTATCGACTC 4594466 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT---CCCACATATCAAACTG 116078 ||| || | |||||| || || || ||| | | ||||||| || |||| Sbjct 4594465 CTTTAGCTTTTGCCAGTCCCAG---AGGTTCGTCGGAACTTTGTCCCACATGTCGTACTG 4594409 Query 116079 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 116138 | || |||| | | || ||||||| | || || |||||||| || | || || Sbjct 4594408 CAAAATTCCTTTGCTTACCGGGCTTCCCTCATAAGTTTCGTATGGGCCTTCGATCTGAGC 4594349 Query 116139 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 116198 ||||| | || || || | || | | || || || || || || | ||||| Sbjct 4594348 TAATTCACAACTGGCTTCCAAAGCCCCATAGTAAATCGTTTCGAATATCTGCTGATTCAA 4594289 Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACC 116258 | || || || ||| | | || || | ||| ||| |||| || | || Sbjct 4594288 GAGGCTCGCTTCATCACTTTCATATGGGAATCGCATGAGAATTAATGCATCAGCAAAGCC 4594229 Query 116259 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC-CACGG 116317 || || |||| ||| | |||||||| |||| ||| ||||| | || ||| || | Sbjct 4594228 CTGAACTCCGATGCCCACGGGGCGATGCCTCAAATTGGACTTCCTTGCC-TCTGGCAGCG 4594170 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 ||||||| || ||||||| | | | || |||||| |||| || ||| |||| ||| | Sbjct 4594169 GATAAAAGTTGATATCGATTATCTTGTTGAGATTTCTGGTAACCGTCTTGGTGACTTCCT 4594110 Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGA 116434 || |||| | |||| | |||| ||| ||||| || | ||| || | Sbjct 4594109 TTAGTTTTTTGAAATCGTAT------GTCTTTTCCGGTGTGACAAACATGTTAAGAGCAA 4594056 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 | || |||| ||||| || | |||||||| | |||||| | |||||| || | Sbjct 4594055 TGGATGCCAAGTTACAAACTGCAATCTCATCCGGGGAGGAGTACTCGACAATTTCTGTGC 4593996 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 |||| || | ||||||||||| | |||| || || ||| |||| || |||| Sbjct 4593995 ACAAGTTACTGCATTTAATGGTGCCAACATTCTGCTGGTTACTCTTCCTGTTGCAGGCAT 4593936 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCC 116586 ||||| |||||||||| || | || || ||| Sbjct 4593935 CCTTGAAGAGCATATACGGATTTCCAGTTTCC 4593904 >seq4471 Length=3711889 Score = 111 bits (122), Expect = 2e-19 Identities = 518/810 (64%), Gaps = 12/810 (1%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || ||| ||||||||||||||||||||| || || || ||| ||||||| Sbjct 604333 GTACTCGCCCACCTTCTTCTCGAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCCAT 604274 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350 |||| || |||||||| | ||| | || || || |||| || || | ||| Sbjct 604273 GAAATTGAAAGGGTTCTTGGTGTTGTAGATCTTTCCAACACCAAGCTCCACCAGCAAACG 604214 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 || | ||| |||| ||||||| |||||| || | ||||| ||||| | ||| Sbjct 604213 GTCTGCGACAAACTCGATGTACTGGGACATCAGGTCGCAATTCATGCCGATCAAGTTTAC 604154 Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470 || || || || | |||| ||| ||||||| |||| || || || | || || Sbjct 604153 GGGAAGGGCATCTGTAAGGAACTCCTGCTCAATGGCCACCGCGTCGCGGATAATCTCGAT 604094 Query 127471 AATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCACAGCAAACTCTT 127529 || || | |||| ||| | || || ||| | || ||||| || Sbjct 604093 GATGCGCTCTCGCTTTGGTC-GCTGCACGAGGTGCTGGAACATCAAGACGGCAAAGTCGC 604035 Query 127530 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 127589 ||| | || ||||| ||||| || ||||| || ||||| ||| || ||||| || | Sbjct 604034 AGTGCAAGCCTTCGTCCCGGGATATAAGTTCGTTGGAGAATGTCAGGCCCGGCATCAGGC 603975 Query 127590 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 127649 | || ||||| | ||||||||| | || ||| |||||||| ||||| || Sbjct 603974 CACGTTTCTTTAGCCAGAAAATAGAGGCGAAGCTGCCGCTAAAGAAGATGCCCTCTACGG 603915 Query 127650 ACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATC 127708 || || || | | ||||| |||| | ||| ||| || | | ||| | | Sbjct 603914 CGGCAAAGGCGATAATTCGCTCTCCAAAATTGGCTGAC-TTGGATGAGATCCAGGAAAGC 603856 Query 127709 GCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTC 127768 ||||| | ||||| || | | || | |||| ||| || | || || | || | Sbjct 603855 GCCCAGTCCGCCTTGCGCTTTACAGCCGGCATCGTCTCGATGGCATTGAACAGGTACTCC 603796 Query 127769 TTTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGA 127826 ||||| |||||| |||||| | || || || ||| ||||| ||| | Sbjct 603795 --CGCTGATGCGGATCTCGGATGTATGTGTCGATCAGGACACTATACATTTCGGAGTGCA 603738 Query 127827 CCATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886 | |||| | | ||| | ||||||| |||| || || | ||||| ||||| | Sbjct 603737 CGTTTTCCATTGCGATCTGGAAACCGTAGAAGCAGCGTGCCTCAGTGATCTGAACCTCCT 603678 Query 127887 CGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 127945 ||| |||| | | | | ||||| || ||||||||||| | ||||| || ||| Sbjct 603677 -GGCTAAATCGCTCAACCAGGTTCTCGTTCACGATTCCATCGGAAGCGGCAAAGAAGGCC 603619 Query 127946 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGT-CGTCGAGATC 128004 || | | ||||| | | || | || || ||| | ||||| |||| ||||| Sbjct 603618 AGCACGTGTGAGATGAAGTGACGCTCGTCGTCCTTTAGGCGATGCCAGTCCGTC-AGATC 603560 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| || ||||| || |||||| ||||||| Sbjct 603559 CTTGGACAGATCCACTTCCTCCACAGTCCA 603530 >seq4472 Length=2353741 Score = 109 bits (120), Expect = 7e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986 ||||||||| || | | ||| || || || ||||| | |||||| | ||||| ||||| Sbjct 1765780 ATCTTTGCCTCCTGTCAAACGAGTACCGAACTGACCGCGTGGCTCCAACAGATTAATATT 1765839 Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 176045 ||| | |||| | ||| | |||| ||||| || || ||| | | | | || || | Sbjct 1765840 GTTAGCACCCACAAAGTTCTGGGCCAGATTGACGATGGTCATCTGTAACGAA-ACCTCTC 1765898 Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCAT 176105 |||| |||||||||||| | || ||||| | | | | ||| |||||||||| ||| Sbjct 1765899 CGTGGTGGTAGGCCGACATCTCGGCCACTGAACCGGAAAGCTGGGCCACCTTCACCTCCC 1765958 Query 176106 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTC 176144 |||| ||| | | |||||||| | |||||||||||| Sbjct 1765959 GCTTGTCGTTTCTCTTGAAGCACGTAAACATGACCTTTC 1765997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613469269917360