Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4563 147 5e-30 seq4475 138 3e-27 seq4042 131 4e-25 >seq4563 Length=5383265 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || ||||||||||| |||| ||||||||| | || ||| | |||||| Sbjct 1837970 AGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCC 1838029 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| ||||||||||| || || ||| || || || Sbjct 1838030 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCT 1838089 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || |||||| |||| |||||| | | || || ||||| ||||| ||| Sbjct 1838090 TGGATTTTAGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTC 1838149 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| |||||||| || ||||| Sbjct 1838150 TTGCCGGTGAGGGTTTTCACGAAGATTTG 1838178 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| | ||| ||||| || || | || ||||||| | || Sbjct 4507147 CGCAGACGCAGCACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGGGTG 4507206 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || |||||||| ||||||||||| || ||| ||||||| Sbjct 4507207 CGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCT 4507266 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||||||||| || || ||||| || || | | ||| || || | Sbjct 4507267 TCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGA 4507326 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || || || || || || Sbjct 4507327 GTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTG 4507364 >seq4475 Length=5362458 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| ||||||||| | || || | ||||||| Sbjct 1656489 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCATCT 1656548 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| |||||||||||||| ||| || || || ||| Sbjct 1656549 TCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCC 1656608 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | |||||| | || || || |||| ||||| ||| Sbjct 1656609 TGGATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTC 1656668 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 1656669 TTGCCAGTCAGGGTCTTCACGAAGATCTG 1656697 Score = 116 bits (128), Expect = 9e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| |||||||| |||| |||||| || | | ||| | |||||| Sbjct 1656717 AGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCT 1656776 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| ||||||||||| || ||| || || || || Sbjct 1656777 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCT 1656836 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | |||||| | | || || |||| ||||| ||| Sbjct 1656837 TGGATCTTGGCCTTCACATTCTCAATGGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTC 1656896 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || | || |||||||| || || |||||| Sbjct 1656897 TTTCCAGTCAAGGTCTTCACAAAGATCTG---CATTTT 1656931 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||| |||||| | |||||||| | ||| | ||||||||||| ||||| Sbjct 1656802 CTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCCGATTACAACATCCAG 1656743 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 || ||||| ||||||||| | ||| Sbjct 1656742 AAGGAGTCCACTCTTCACTTGGTT 1656719 >seq4042 Length=640736 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| |||||||| |||| |||||||| | ||| || | ||| || |||||||||||||| Sbjct 503638 AGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCC 503697 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 |||||||| | ||||||||| || || ||||| || ||||| ||||| ||| Sbjct 503698 AGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT 503757 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| |||| |||||| | | || || ||||| ||||| ||||| || || | ||| Sbjct 503758 GACGTTCTCGATGGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTCAAAGT 503817 Query 199612 TTTCACAAAAATTTG 199626 ||||| |||||||| Sbjct 503818 CTTCACGAAAATTTG 503832 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| | || | ||| |||||||| || | |||||||| | ||| || Sbjct 502931 CGTAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGAATATTGTAGTCGGACAAGGTA 502990 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || |||||||||||||| |||||||| | ||||||||| || || ||||| Sbjct 502991 CGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCC 503050 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| |||||| | | || || ||||| Sbjct 503051 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAA 503110 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || |||||||| || || Sbjct 503111 GTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTG 503148 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| |||||||| |||| |||||||| | ||| || | ||| || |||||||||||||| Sbjct 503182 AGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCC 503241 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 |||||||| | ||||||||| || || ||||| || ||||| ||||| ||| Sbjct 503242 AGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT 503301 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| |||| |||||| | | || || ||||| ||||| ||||| || || || || Sbjct 503302 AACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTAAGGGT 503361 Query 199612 TTTCACAAAAATTTG 199626 |||||||| || || Sbjct 503362 CTTCACAAAGATCTG 503376 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || ||||| |||| |||||||| | ||| || | ||| || |||||||||||||| Sbjct 503410 AGTAGATTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCC 503469 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 |||||||| | ||||||||| || || ||||| || ||||| ||||| ||| Sbjct 503470 AGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT 503529 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 ||| |||| |||||| | | || || ||||| ||||| ||||| || ||||| || Sbjct 503530 GACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGGGT 503589 Query 199612 TTTCACAAAAATTTG 199626 |||||||| || || Sbjct 503590 CTTCACAAAGATCTG 503604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178846891001382