Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4720 98.7 1e-15 >seq4720 Length=6167446 Score = 98.7 bits (108), Expect = 1e-15 Identities = 274/417 (66%), Gaps = 14/417 (3%) Strand=Plus/Minus Query 15879 ATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTC 15938 |||| ||||| |||||||| || || | || || | || || ||||| || || || Sbjct 103521 ATCTGTCGATCGAAGCGACCCGGCCGCATAAGGGCCTTGTCGAGAATATCTACACGGTTA 103462 Query 15939 GTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGC 15998 || || || | || || | | ||| ||| ||||||||||||||| || ||| Sbjct 103461 GTGGCCGCCAGCACCACCACATTCGTTGTTGTATTAAAACCATCCATCTCAACCAGAAGT 103402 Query 15999 TGGTTAATAGTTTGTTCCCGTTCATCATT-----CGCTGG-CATACCACCAGCACTGCGT 16052 ||||| | || | ||| | ||| | || || | | || ||| ||| Sbjct 103401 TGGTTGAGGGTATTCTCCTGCTCAGAGTGGCCGCCGAAGGTCTTTCCTCCA------CGT 103348 Query 16053 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 16112 | | ||||| || || || || ||||| || | |||||| ||| || | ||| || Sbjct 103347 TTCCGACCCACAGCGTCGATTTCGTCAATAAATAGGATGCAGGGTGCATGCTTGCGGGCC 103288 Query 16113 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 16172 | | || | || || |||||| | ||||| || ||||||||||| | ||| | | Sbjct 103287 ATGGCGAACATGTCACGAACACGCGAAGGTCCCACGCCCACAAACATCTCGAGAAACTCT 103228 Query 16173 GCGGCGGAACATTGG-ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | | |||| || | |||||||| ||||||| ||| || || |||| ||| ||||| Sbjct 103227 GAGCCGGA-CACGGTTATGAAGGGCACATTAGCTTCGCCGGCGGTGGCCTTGGCCAGAAG 103169 Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 || |||||||| || || || | || | ||| || ||| ||||||||||| Sbjct 103168 CGTTTTACCCGTGCCGGGTGGGCCGGTTAGCATGGCCCCCTTTGGTATCTTGGCGCC 103112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620704022601120