Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1050 96.9 4e-15 >seq1050 Length=15447 Score = 96.9 bits (106), Expect = 4e-15 Identities = 336/522 (64%), Gaps = 8/522 (2%) Strand=Plus/Plus Query 154587 AAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCA 154646 |||||||| || | ||||| |||| |||| | |||| || || || ||| | || | Sbjct 6232 AAATGGTTGTGCGCTATCAGCGGGTATGATGCCGTATCGTTCCAGCCAAACTCCGGGGCG 6291 Query 154647 CAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGAT 154706 |||||||| ||||| || ||| | || ||| || || || | | | || |||| Sbjct 6292 CAGGGTGAATATGCCGGTCTGCTGGCCATCAGCGCCTATCACCGCGCACAGGGTGATGCA 6351 Query 154707 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTC 154766 | | | || || |||| || | || || || || || || || ||| ||| Sbjct 6352 CATCGTACGGTCTGCCTGATCCCGGCCTCCGCGCACGGCACCAACCCGGCTTCTGCCCAG 6411 Query 154767 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAA 154826 ||||| || ||| | || || | |||| ||| |||| | || || || ||| || | Sbjct 6412 ATGGCGGGCATGCAGGTGGTTGTGGTCAGGTGCGATGCGGGCGGCAATATCGACCTCGAC 6471 Query 154827 GATCTAGAGAAGAAAGCAATCATGAATACATT----TGAACTGTCATGTATTATGATTAC 154882 ||| | | |||| || | ||||| ||| ||| | | ||||| || Sbjct 6472 GATATGCGGGCCAAAGTG--CAGG--TACATGCCCGTGATCTGGCTGCGGTGATGATCAC 6527 Query 154883 ATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCA 154942 ||||| || || || || || |||||| | ||| | | || ||| | | || || Sbjct 6528 TTACCCCTCCACCCACGGCGTGTTTGAAGAAAGCATGCGTGAAATCTGTGATCTGGTGCA 6587 Query 154943 TGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGC 155002 ||| ||||||||||| || | ||||| || || | || |||||||| || || || Sbjct 6588 TGAGGCCGGTGGTCAGGTGTACGTGGATGGCGCGAACATGAACGCACAGGTCGGTCTGGC 6647 Query 155003 AAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTAT 155062 || ||| || || | ||||| | || | ||| | || ||||| ||||| || Sbjct 6648 GCGTCCGGCTGATTACGGCGGGGATGTCAGCCACTTCAACCTGCACAAAACCTTCTGCAT 6707 Query 155063 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||| ||||| || || ||||| ||| | || || || || || Sbjct 6708 TCCGCATGGCGGCGGTGGTCCCGGCATGGGACCGATTGGCGT 6749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579176990168640