Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4475 179 8e-40 seq4563 152 1e-31 seq4042 131 4e-25 >seq4475 Length=5362458 Score = 179 bits (198), Expect = 8e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||||||||| || || || |||||||||| |||||| | |||||||| Sbjct 1656719 AACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCTTC 1656778 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || || |||||||| || || || |||||||| Sbjct 1656779 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTG 1656838 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||||||| ||||| || || || | ||||| Sbjct 1656839 GATCTTGGCCTTCACATTCTCAATGGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTCTT 1656898 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||| ||||| || || || || | ||||||| Sbjct 1656899 TCCAGTCAAGGTCTTCACAAAGATCTGCATTT 1656930 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| |||| || || | |||||||||||||| Sbjct 1656497 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCATCTTCGAGCTG 1656556 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || ||||||||||| || || || ||||| || || || Sbjct 1656557 CTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCCTGGATCTT 1656616 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || |||||||||||||| || |||||||| || || | ||||| || || Sbjct 1656617 GGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTGCCAGT 1656676 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 1656677 CAGGGTCTTCACGAAGATCTGCAT 1656700 >seq4563 Length=5383265 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| |||| ||||| | ||||| || ||||| Sbjct 1837978 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTG 1838037 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || || ||||| |||||||| || |||||||| ||||| Sbjct 1838038 CTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGGATTTT 1838097 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || ||||| |||||||||||| ||||| || | ||| | ||||| || || Sbjct 1838098 AGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGT 1838157 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | |||||| Sbjct 1838158 GAGGGTTTTCACGAAGATTTGCAT 1838181 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | |||||||||||| |||||||| || || | || || | |||||||| ||||| Sbjct 4507164 GTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 4507223 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || || ||||||||||| ||||||||||| ||||| || Sbjct 4507224 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTT 4507283 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || || || || |||||| ||| || ||||| || | ||||| || || Sbjct 4507284 GGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTGCCCGT 4507343 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 4507344 GAGGGTCTTAACGAAGATCTGCAT 4507367 >seq4042 Length=640736 Score = 131 bits (144), Expect = 4e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTAC 195001 ||| ||||| || || |||||||| |||| |||| || | || || || |||||||| | Sbjct 503638 AGTAGACTCCTTCTGGATATTGTAGTCGGACAAG-GTACGTCCGTCCTCCAGCTGCTTTC 503696 Query 195002 CTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT 195061 | |||||||| | || || || ||||| || || || || ||||| || || || || Sbjct 503697 CAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCT 503756 Query 195062 TGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121 |||||||||| |||||||| ||| || ||||| | ||| | ||||| || ||||||| Sbjct 503757 TGACGTTCTCGATGGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTCAAAG 503816 Query 195122 TTTTTACGAACACTTGCAT 195140 | || ||||| | |||||| Sbjct 503817 TCTTCACGAAAATTTGCAT 503835 Score = 109 bits (120), Expect = 1e-18 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTAC 195001 ||| ||||| || ||||||||||| |||| |||| || | || || || |||||||| | Sbjct 502954 AGTAGACTCCTTCTGAATATTGTAGTCGGACAAG-GTACGTCCGTCCTCCAGCTGCTTTC 503012 Query 195002 CTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT 195061 | |||||||| | || || || ||||| || || || || |||||||| || || || Sbjct 503013 CAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCT 503072 Query 195062 TGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121 |||||||||| |||||||| ||| || || || | || | ||||| || || | | Sbjct 503073 TGACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGGG 503132 Query 195122 TTTTTACGAACACTTGCAT 195140 | || || || | ||||| Sbjct 503133 TCTTCACAAAGATCTGCAT 503151 Score = 95.1 bits (104), Expect = 3e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTAC 195001 ||| || || || || |||||||| |||| |||| || | || || || |||||||| | Sbjct 503410 AGTAGATTCCTTCTGGATATTGTAGTCGGACAAG-GTACGTCCGTCCTCCAGCTGCTTTC 503468 Query 195002 CTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT 195061 | |||||||| | || || || ||||| || || || || ||||| || || || || Sbjct 503469 CAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCT 503528 Query 195062 TGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121 |||||||||| |||||||| ||| || || || | || | ||||| || || | | Sbjct 503529 TGACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGGG 503588 Query 195122 TTTTTACGAACACTTGCAT 195140 | || || || | ||||| Sbjct 503589 TCTTCACAAAGATCTGCAT 503607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109411291457582