Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq1364 197 5e-46 >seq1364 Length=4516 Score = 197 bits (218), Expect = 5e-46 Identities = 519/792 (66%), Gaps = 0/792 (0%) Strand=Plus/Plus Query 21737 TATGGCCTGTCAGGACAATTTGGCGTTCATGCGTCCGCTCAAGAGCGGCTCGATGCAGCT 21796 |||||| |||| | ||| || |||||||||||| | || || || ||| |||| Sbjct 1248 TATGGCAGTTCAGAATAATCTGAAATTCATGCGTCCGTTGAAAGATGGATCCATGAAGCT 1307 Query 21797 CGTCGTGACGTCGCCACCCTACAACATCGGCAAGAGGTACGAAAAGCGGTCGCCGCTGGA 21856 |||| || || || || || || ||||| || ||| || || || | | || || Sbjct 1308 AATCGTCACATCACCGCCGTATAATATCGGAAAAGCGTATGAGAAACGCACTACTCTTGA 1367 Query 21857 CGCCTACGTGCAGGCCCAGGCGCAGGTCATCTCCGAGTGCGTGCGGCTTCTCAGCCCGCA 21916 || || || | || | || || || | || || || || | || || Sbjct 1368 GAAATATGTTCAAGATCAAACTCAAGTAATAACAGAATGTGTACGTTTACTGGATGAGCG 1427 Query 21917 CGGCTCGCTCTGCTGGCAGGTCGGCAATCACGTGCAGAAAGGCGAGATATTCCCGCTCGA 21976 || || || || ||||| || || ||||| || ||||| || || ||||| || || || Sbjct 1428 TGGATCTCTTTGTTGGCAAGTTGGTAATCATGTTCAGAATGGTGAAATATTTCCACTAGA 1487 Query 21977 CACCGTGCTCTATCCGGTCTTTCGCGAGCACGGCCTGAAGCTACGGAATCGCGTGGTGTG 22036 || || || || | | || || || || || ||| |||| ||| | | | || Sbjct 1488 TACTGTTCTTTACCATATTTTCAAAGACCATGGTCTTAAGTTACGAAATAGAATTATTTG 1547 Query 22037 GCATTTCGAGCACGGCCTGCACTGTTCGAACCGCCTGTCCGGCCGCTACGAGACGATCCT 22096 |||||||||||| || |||| | | || | ||||| |||||||| || || || | Sbjct 1548 GCATTTCGAGCATGGATTGCATTCTAAAAATAGACTGTCAGGCCGCTATGAAACCATTAT 1607 Query 22097 CTGGTTCACCAAGACCGACGACTACGTTTTCAACCTCGACCCGATCCGGGTGCCATCGAA 22156 ||||| || || || || || || || || || ||||| || || ||||| || Sbjct 1608 GTGGTTTACTAAAGGAGATGATTATACATTTAATCTAGATCCGATACGTGTTCCATCAAA 1667 Query 22157 ATACCCCGGAAAGAAATACTTCAAAGGGCCGAAGGCTGGTCAGCTCTCCTGCAATCCGCT 22216 ||| || || ||||||| ||||| || || ||||| ||||| || | || || || Sbjct 1668 ATATCCAAATAAAAAATACTATAAAGGACCTAAAGCTGGGCAGCTTTCTGGAAACCCTCT 1727 Query 22217 GGGAAAAAACCCAGGCGACGTGTGGATTTTCCCCAACGTCAAGAACAACCACGTCGAAAA 22276 || ||||| || || || | ||||| || || || || || || || || || ||||| Sbjct 1728 AGGCAAAAATCCGGGTGATATTTGGATATTTCCAAATGTAAAAAATAATCATGTTGAAAA 1787 Query 22277 GACCGACCATCCATGCCAGTTCCCGGTCGAGCTGGTCGAGCGGTTGGTGCTGTCGCTGAC 22336 || ||||| ||||| || ||||| || | ||||| | | || || || | || Sbjct 1788 AACAATTCATCCTTGCCAATTTCCGGTTGAATTAGTCGAAAGACTTGTTCTTTCATTAAC 1847 Query 22337 CGAGCCCGGTGACGCGGTGCTCGACCCGTACATGGGCGTGGGCTCGTCGGTCGTCGCTGC 22396 || || || || | || ||||| ||||| || || || || | || || || Sbjct 1848 GGATGAAGGGGATAATGTTTTTGATCCGTATATGGGAGTCGGATCTTCAATAGTGGCAGC 1907 Query 22397 CCTCAAGCACGACCGCCTCGGGTACGGCTGCGACGTCGTGAAGGAGTACGTCGATGCCGC 22456 | ||| | | || | || || || ||||| || || || ||||| |||||| || Sbjct 1908 TATAAAGAATAATCGTATTGGATATGGGTGCGATGTTGTTAAAGAGTATGTCGATATAGC 1967 Query 22457 CTGGGAGCGCGTGCACCGGCTTCGCGCCGGCACACTCCAGACGCGCCCCATGCACAAGCC 22516 |||||| | || || |||| || ||||| || | || || || ||| | ||||| Sbjct 1968 TTGGGAGAGGGTTCATGACTTTCGAGCAGGCACTCTTGAAACTCGTCCTATGAATAAGCC 2027 Query 22517 CGTCTATGACCC 22528 ||||||||||| Sbjct 2028 AGTCTATGACCC 2039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197777183122068