Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq4473 109 7e-19 >seq4473 Length=1515531 Score = 109 bits (120), Expect = 7e-19 Identities = 173/246 (70%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 197041 CCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGATTGTAACAGGCGAGT 197100 || || || || || || ||| || |||| || ||| |||| || ||| ||||| || Sbjct 160172 CCTGTTCCAATTTTGCATATGCTTTGGTACTCCTCGTTTTCGGTATCGTAGCAGGCAAGC 160113 Query 197101 AAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCACC 197160 || || | || || ||||| || | | || || ||| |||| || || || || Sbjct 160112 AAAAATCCTCCATAAGTTCCAGTACGCCGGCCTTTTCCCTTGTAGCCACCTATCACTACG 160053 Query 197161 AGATCCAGAGTGTCGCACACCCCTTCCATG--TAATCTTTCTTCAGTTTGAGCCAGCTTC 197218 || |||| | ||||| ||| || || ||||| || |||||||| |||||| | | Sbjct 160052 AGGTCCAATGAGTCGCCCACA--TTGGATAAATAATCCTTTTTCAGTTTTAGCCAGTTCC 159995 Query 197219 TAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCT 197278 | |||||||| |||||||||||||| || | | | ||||| ||||| | ||| | |||| Sbjct 159994 TCGATCTCTTTGCAATCTCGTAGGTGGCCTCTTCATCCAGAGTCTTAACCATAAGGCCCT 159935 Query 197279 CGCAAT 197284 | |||| Sbjct 159934 CACAAT 159929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676687761192480