Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq3473 89.7 7e-13 >seq3473 Length=7851 Score = 89.7 bits (98), Expect = 7e-13 Identities = 175/256 (68%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 84929 GAGTGGAAGCCCAGCAGGCCCAGGCCCACCGAGCGCTCGCGC-ACGGCGCTGTAGGAGGC 84987 |||||||| |||| | ||| || || || || |||||||| | | ||| |||| || Sbjct 2298 GAGTGGAAACCCATGACGCCAAGCCCAACTGAACGCTCGCGGGAAGCCGCA-TAGGCCGC 2240 Query 84988 CCGGTGCATCTCGTCCGGCGCGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCG 85047 | | ||| || ||| ||| ||| || || |||| | ||||||||| | | | Sbjct 2239 CTTCTTCATTTCCGGCGGTGCGCGGTCAATAAAGTCCTGCAACACGTTGTCCAGAAAGAG 2180 Query 85048 CATCAGGTCTTCGATGAAGGTCGGGTGATCCTTCCATTCGACCCACTTTTCGGCGTTGAC 85107 ||||| |||||| || || ||| | || | ||| | | ||||| | || ||||| Sbjct 2179 CATCACGTCTTCAATAAACTGCGGCTTGTCGTGCCACTGGTCCCACGTCTCAAGGTTGAG 2120 Query 85108 GCTCGACAGGCAGCAGACGGCCGTGCGCATCTTGCCGAACACGTCGCGGCCGGTGCCCAG 85167 | ||||||||||| || ||||| ||| ||||||| |||| ||||| ||| Sbjct 2119 GGAGGACAGGCAGCACACAGCCGTCCGCTGCTTGCCGTGATGGTCGATCCCGGTCGGCAG 2060 Query 85168 CATGATCTCCGAGCAG 85183 | |||| ||||||||| Sbjct 2059 CGTGATTTCCGAGCAG 2044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715731747148800