Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4471 138 2e-27 seq4563 104 4e-17 >seq4471 Length=3711889 Score = 138 bits (152), Expect = 2e-27 Identities = 357/528 (68%), Gaps = 22/528 (4%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGG-CTGGTA-CGCTCTATCC 25569 |||||| | || || | |||||| ||||||| || |||| |||| | ||| ||| Sbjct 603529 CTGGACTGTGGAGGAAGTGGATCTGTCCAAGGATCTG-ACGGACTGGCATCGC-CTAAAG 603586 Query 25570 AAAGACGAGCAGCATTT--TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 | ||||||| || || ||||| ||||| |||| |||||||| || || ||||| | Sbjct 603587 GACGACGAGCGTCACTTCATCTCAC--ACGTGCTGGCCTTCTTTGCCGCTTCCGATGGAA 603644 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | ||||||||||| ||| ||| |||| | | ||| || ||| | ||||| | Sbjct 603645 TCGTGAACGAGAACCTGGTTGAGCGATTTAGCCAGGAGGTTCAGATCACTGAGGCACGCT 603704 Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC 25747 | ||||||||||||||||| || || ||||| |||||||| || ||||| | | | Sbjct 603705 GCTTCTACGGTTTCCAGATCGCAATGGAAAACGTGCACTCCGAAATGTAT---AGTGTCC 603761 Query 25748 TGAT---GACGTACATTACAGA--CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGA 25802 |||| || ||||| ||| || | | | ||| | ||||| ||||||||| Sbjct 603762 TGATCGACACATACATCCGAGATCCGCATCAGCGGGAGTAC--CTGTTCAATGCCATCGA 603819 Query 25803 GCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCC-AGA 25861 | || || | ||| | |||||| ||||| | |||||| || || || Sbjct 603820 GACGATGCCGGCTGTAAAGCGCAAGGCGGACTGGGCGCTTTCCTGGATC-TCATCCAAGT 603878 Query 25862 GCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCG 25921 || | ||||| ||||| | | |||||||| || || ||||||||||| || |||| Sbjct 603879 CAGCCAATTTTGGAGAGCGAATTATCGCCTTTGCCGCCGTAGAGGGCATCTTCTTTAGCG 603938 Query 25922 GTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTT 25980 | || || | || |||||||| ||| | | | || | ||||| || ||| || Sbjct 603939 GCAGCTTCGCCTCTATTTTCTGGCTAAAG-AAACGTGGCCTGATGCCGGGCCTGACATTC 603997 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCC 26028 |||||||| || || | ||||||| || | ||| | || |||||| Sbjct 603998 TCCAACGAACTTATATCCCGGGACGAAGGCTTGCACTGCGACTTTGCC 604045 >seq4563 Length=5383265 Score = 104 bits (114), Expect = 4e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 222040 CATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCAC 222099 |||||| || || || ||||||| || | ||| ||||||| || || | ||| ||| Sbjct 4593727 CATGAAAAGATCAGGTATCCACAAGGCGTAAAAAAGATCTCGGGCGCGATTCTCTTCCTT 4593668 Query 222100 GCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159 ||| |||||||| | || |||| ||| ||||| | |||| |||||| |||||||| || Sbjct 4593667 GCCAGTGTTTTTCTTGAGTTCCAGAAATTCAAAGACATCAGAGTGCCAGGGCTCCAGGTA 4593608 Query 222160 GACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 | || | || || || |||||| ||| ||||||||||| Sbjct 4593607 AATAGCAAAGGCTCCTGGACGCTTGCCGCCTCCCTGATCCAC 4593566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928787374170240