Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq891 89.7 5e-13 seq1116 82.4 8e-11 >seq891 Length=32094 Score = 89.7 bits (98), Expect = 5e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113 |||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 11060 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGCTGGTTCGAATCCAGC 11118 >seq1116 Length=12190 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 28884 GATTAGCTCAGCGGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTC 28943 ||||||||||| |||||||| |||||||||||||||| || ||||||||| | |||||| Sbjct 1957 GATTAGCTCAGAGGTAGAGCGTCTCGTTTACACCGAGAGGGCCGGCGGTTCGACCCCGTC 1898 Query 28944 ATC 28946 ||| Sbjct 1897 ATC 1895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516448068624000