Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4889 107 2e-18 seq1050 102 9e-17 >seq4889 Length=666116 Score = 107 bits (118), Expect = 2e-18 Identities = 344/519 (66%), Gaps = 20/519 (4%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | |||||||| || ||||| || ||||| ||||| ||||| || Sbjct 577449 ACGCCAATGGGACCCATTCCAGGACCACCTCCTCCGTGCGGAATGCAGAAGGTCTTGTGC 577508 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | ||||| |||||| || | ||| | ||| ||||| ||| Sbjct 577509 AGATTCAGATGCGAGACATCGCTACCATAATCTCCTGGGCGACACAAACCCACCTGGGCA 577568 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| || || || || || |||| | || | | | ||||| Sbjct 577569 TTCATGTTCGCTCCATCTAGGTACACTTGTCCTCCATGTTTGTGGATCAGAGTGCATATA 577628 Query 138363 TGTCTGATGTTTGTTTCAAATACACC-ATGAGTCGATGGATATGTAATCATAATACATGA 138421 | || | || ||| || || || ||| ||||||||||| |||||||| | || || Sbjct 577629 TCCGCGACGGTTTCTTCGAAAACTCCCATG-GTCGATGGATAAGTAATCATTAGGCAGGA 577687 Query 138422 GAGTTCA--AATGTATTCATGATTGCTTT-CTTCTCTAGATCTTTGATGTCTATGTTGCC 138478 | |||| || ||| | ||||| |||| | || ||||| ||| || Sbjct 577688 TAATTCATGGGCGTGTTCCT--CCGCTTTAGCTCTC-AAATGGGCCATGTCGATGGAACC 577744 Query 138479 ATCATCATCACA-CTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGAT 138537 || | | | | ||| | | | | || |||||||||||||| ||| ||| |||| Sbjct 577745 AT-TTGACAATATCTTAATAGGTTCCACCTTCATTCCTGCCATTTGAGCAGAAGCTGGAT 577803 Query 138538 TAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTA---TCATCTCCTGATC 138594 | |||||||| || || || ||||| || | |||||| | | |||| || | | Sbjct 577804 TTGTTCCATGAGCGGAGATGGGAATCAGGCAGATATTTCTGTGACCTTCATTTC--GGTG 577861 Query 138595 CTTGATGATA--TGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTT 138652 | | ||| || | || ||| ||| ||||| |||||||| ||||||| |||| || Sbjct 577862 C-TCATGGTAACTCCT--GATGGCTCTTAGTCCGGCATACTCTCCCTGTGCCCCTGAATT 577918 Query 138653 AGGTTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691 || || || || || ||| | ||||| || ||||| Sbjct 577919 CGGCTGGAAGGAAATTCTATCGTACCCTGTAATCTCACA 577957 >seq1050 Length=15447 Score = 102 bits (112), Expect = 9e-17 Identities = 337/522 (65%), Gaps = 8/522 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | ||| ||||| || || ||||| ||||| ||||| || || || Sbjct 6749 ACGCCAATCGGTCCCATGCCGGGACCACCGCCGCCATGCGGAATGCAGAAGGTTTTGTGC 6690 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || | || | ||||| | || || ||| || || ||||| |||||||| Sbjct 6689 AGGTTGAAGTGGCTGACATCCCCGCCGTAATCAGCCGGACGCGCCAGACCGACCTGTGCG 6630 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| | || ||||||||||| ||||| || | | ||| || Sbjct 6629 TTCATGTTCGCGCCATCCACGTACACCTGACCACCGGCCTCATGCACCAGATCACAGATT 6570 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | ||| || |||||| || || || || || || || || ||||| | | Sbjct 6569 TCACGCATGCTTTCTTCAAACACGCCGTGGGTGGAGGGGTAAGTGATCATCACCGCAGCC 6510 Query 138423 AGTTCA----AATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCC 138478 || ||| ||||| | || |||| | | ||| | || ||| || ||||| Sbjct 6509 AGATCACGGGCATGTA--CCTG--CACTTTGGCCCGCATATCGTCGAGGTCGATATTGCC 6454 Query 138479 ATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATT 138538 | |||| ||| |||| | || || | ||| || ||||| ||| ||| || || Sbjct 6453 GCCCGCATCGCACCTGACCACAACCACCTGCATGCCCGCCATCTGGGCAGAAGCCGGGTT 6394 Query 138539 AGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTG 138598 || || || || || | || ||||| || || | | | |||| || | | | Sbjct 6393 GGTGCCGTGCGCGGAGGCCGGGATCAGGCAGACCGTACGATGTGCATCACCCTGTGCGCG 6334 Query 138599 ATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTG 138658 ||||| || ||| || | ||| || ||||| |||||||| | || | ||| || || Sbjct 6333 GTGATAGGCGCTGATGGCCAGCAGACCGGCATATTCACCCTGCGCCCCGGAGTTTGGCTG 6274 Query 138659 TAATGATATAGAATCAAAACCTGTGATATCACATAACCATTT 138700 || |||| | |||| | || ||||| | || |||||||| Sbjct 6273 GAACGATACGGCATCATACCCGCTGATAGCGCACAACCATTT 6232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578962603423920