Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4563 156 5e-33 seq4472 95.1 1e-14 >seq4563 Length=5383265 Score = 156 bits (172), Expect = 5e-33 Identities = 812/1275 (64%), Gaps = 47/1275 (4%) Strand=Plus/Plus Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 ||||||| |||| || ||||||| || || ||||||||||| || || |||| || Sbjct 4593687 GAGATCTTTTTTACGCCTTGTGGATACCTGATCTTTTCATGAAACGTGTAGAGGCCAATG 4593746 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 | | ||||| ||| | || || |||| || || || ||| | ||| || | Sbjct 4593747 GAGATTGGTCCCTTATGTGCCCGCACAAATGCCCTGGCCTTCACGATGTATGGGGCGATG 4593806 Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866 | |||||| | || || ||||| | ||||| | ||||| || || || Sbjct 4593807 AATTTGAAAAGTTATATGTGAAATATGAGCAAGAGGGCCGTGCCAACCGAACAGTTA-AG 4593865 Query 75867 CCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATG 75925 | | || ||| || ||| | || |||| ||| ||||||| || |||||| Sbjct 4593866 GCTCAATCCTTATGGTTCGCCATTATTGAAGCACAAGTGGAAACTGGAAATCCGTATATG 4593925 Query 75926 CTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGC 75985 || | ||||||||| || |||| |||||||||||| ||||| | || || || || || Sbjct 4593926 CTCTTCAAGGATGCCTGCAACAGGAAGAGTAACCAGCAGAATGTTGGCACCATTAAATGC 4593985 Query 75986 TCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045 || | ||||| |||||| | |||||| | |||||||| || ||||| || Sbjct 4593986 AGTAACTTGTGCACAGAAATTGTCGAGTACTCCTCCCCGGATGAGATTGCAGTTTGTAAC 4594045 Query 76046 TTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTTTTGATTAT 76102 |||||||| || || ||| | || ||||| ||| || || | |||| Sbjct 4594046 TTGGCATCCATTGCTCTTAACATGTTTGTCACACCGGAAAAG------ACATACGATTTC 4594099 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 ||||||| | ||| |||| |||| ||||||| |||||| ||| | || || | Sbjct 4594100 AAAAAACTAAAGGAAGTCACCAAGACGGTTACCAGAAATCTCAACAAGATAATCGATATC 4594159 Query 76163 AATTTTTATCCCGTTG--AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 || |||||| ||| || ||| || | ||||| ||| || | || | || | || Sbjct 4594160 AACTTTTAT-CCGCTGCCAGA-GGCAAGGAAGTCCAATTTGAGGCATCGCCCCGTGGGCA 4594217 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATG 76280 | || ||||| || | || |||| ||| ||| | || | | ||| ||| |||| Sbjct 4594218 TCGGAGTTCAGGGCTTTGCTGATGCATTAATTCTCATGCGATTCCCATATGAAAGTGATG 4594277 Query 76281 AAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGA 76340 |||| | ||||| | || || ||||| || || | | | |||| || | Sbjct 4594278 AAGCGAGCCTCTTGAATCAGCAGATATTCGAAACGATTTACTATGGGGCTTTGGAAGCCA 4594337 Query 76341 GTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 |||||||||| ||| | | |||| | || || || | |||||| || | | Sbjct 4594338 GTTGTGAATTAGCTCAGATCGAAGGCCCATACGAAACTTATGAGGGAAGCCCGGTAAGCA 4594397 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGG 76457 |||| | | |||| || ||||||| ||| | || || || || |||||| Sbjct 4594398 AAGGAATTTTGCAGTACGACATGTGGGACAAAGTTCCGACGAACCT---CTGGGACTGGC 4594454 Query 76458 ATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 76517 | || ||||| || ||| || | ||| | || ||| || || | || || | Sbjct 4594455 AAAAGCTAAAGGAGTCGATAAAGAAGCACGGTGTCCGGAACTCCCTGCTGGTTGCTCCTA 4594514 Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577 |||||||||| || || || || || |||| || || |||| || || || || || | Sbjct 4594515 TGCCAACAGCATCTACTGCTCAGATTATGGGCAACAACGAATCTTTCGAGCCGTATACTA 4594574 Query 76578 CAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCG 76637 | || || || |||||| || | || || || | || ||| | || | Sbjct 4594575 CTAATATTTATACCAGAAGAGTTCTGTCTGGCGAATTCCAGGTGGTTAACCATCATTTGT 4594634 Query 76638 TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TCATGGTGA 76694 | | ||| | | || | | | ||| | | || |||||| | | |||| | Sbjct 4594635 TGAGGGACTTGACTGAGCTGGACTTGTGGGACGATGACATGAAGAACCAAATCAT--TTC 4594692 Query 76695 AAGCGGGTGGTTCCATTCAAAATATCTCAGA-TAT--CCCAGATGATATCAAGAATCTCT 76751 ||| || ||||| ||||||||||| | ||| ||| | |||| | | || | | || | Sbjct 4594693 CAGCAGG-GGTTCAATTCAAAATAT-TGAGACTATTCCACAGAAGGT-TCGTG-ACCTTT 4594748 Query 76752 ACCGCACAGTGTGGGAAATCAAGATGAAAGATGTC----ATTGACATGGCCGCAGATCGT 76807 || || || ||||||||| |||| ||| ||| | |||||||| |||||| Sbjct 4594749 ACAAAACCGTTTGGGAAATCTCTGTGAA----GTCCACAATTAAAATGGCCGCTGATCGT 4594804 Query 76808 GGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT---GGAAAGTCCAACGATG 76864 ||| || || ||||| ||||| | || ||| ||| | | || | ||| ||| Sbjct 4594805 GGTGCGTTTATAGATCAGAGTCAGTCCTTTAA--TATACATGTAGCAGAGCCAAACTATG 4594862 Query 76865 TCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTAC 76924 || || | || || || | ||| | |||||| |||||||||||||||||||| Sbjct 4594863 -GAAAACTGACGTCCATACACTTTTACTCCTGGAAAGCTGGGCTCAAAACCGGAATGTAT 4594921 Query 76925 TATCTCCGATCAAAG 76939 ||||| || ||||| Sbjct 4594922 TATCTGCGGACAAAG 4594936 >seq4472 Length=2353741 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/205 (72%), Gaps = 9/205 (4%) Strand=Plus/Minus Query 13534 TCGCAAGTC---CAAAATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTAC 13590 |||||| || ||| |||| |||||||||||| |||| ||||| ||| |||| ||| Sbjct 1766890 TCGCAAATCGAGCAAGATTAAGGGTATTCCCAAGCTGGAGGACGCTAACGAGGCCGGT-- 1766833 Query 13591 GGCACAATCTGGA--AAGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTC 13648 |||| | | || || || ||||||||| |||| ||||| || || || || | | Sbjct 1766832 GGCAAGAATTCGATTAACTGCACTCTCATTCTCACTGAGGGAGACTCAGCCAAGTCTTTG 1766773 Query 13649 GCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGT 13708 || || | ||||| ||| |||||||| || ||||| || ||||| ||| | ||| Sbjct 1766772 GCTGTCTCTGGTCTGGGCGTCATTGGTCGTAATTTTTACGGAGTTTTCCCGCTTAGGGGT 1766713 Query 13709 AAA-TGTAAGAATGTTCGGGACGCT 13732 ||| ||| |||||| || || ||| Sbjct 1766712 AAACTGT-TGAATGTGCGTGAGGCT 1766689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596532717084480