Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq2845 145 3e-30 >seq2845 Length=43607 Score = 145 bits (160), Expect = 3e-30 Identities = 413/621 (67%), Gaps = 28/621 (5%) Strand=Plus/Plus Query 44376 GCGGGACCCATGATTTGCAGA--TGTCGGCTATCGCATCGGCATAGACACGGACCTCTTT 44433 |||| ||||||| | |||| | || || || || || ||||| || |||| || | Sbjct 31107 GCGGCACCCATGCAT-GCAGGATTTTCAGC-ATGGCTTCCGCATAAACCCGGATTTCATA 31164 Query 44434 CTGGGCATGTTCATCGGCCCGCAGGCGCAGGAAGTGGAAGAGGTTGTGTAGGTCAATCTT 44493 ||| ||||| || ||||||| ||| || || | |||||||| || |||||||| Sbjct 31165 CTGCGCATGCGGGTCCAGCCGCAGGGCCAGAAAATGCATCAGGTTGTGCAGATCAATCTT 31224 Query 44494 CCAATACCATTGGGTGTAGACATTGACCGGCAAGTTCATGCGGGCCAGTTCGCGGGCCAA 44553 ||| ||||| ||||| ||| || || | || ||| || || |||||||| || |||| Sbjct 31225 CCAGTACCACTGGGTATAGGTGTTCACGGTCAGGTTGATACGCGCCAGTTCACGCGCCAG 31284 Query 44554 GCCGTCCTGACCGTCATC---GCTGATCATCTCTTCATAGTGATCATAGGCGTTCTGGGC 44610 |||| | | || || ||| | ||| ||||| | |||| | ||| Sbjct 31285 ACCGTAGCCATCCTCTTCCGTGCTCAGCATGGTCTCATAATTGCGGTAGGTGCGAATGGC 31344 Query 44611 GTCGTTCATCAGGTAGTGTAGGACCCGCTGAGCC-TCAGCCCCCTGAAGAACATTATCAT 44669 || | | ||| | | ||| || | | | ||| || || |||| || Sbjct 31345 ATCATCCCGCAGAATATCCATGACG-GCAGCGGCATCATCCGGGGCCAGCACATCGCCA- 31402 Query 44670 CGCGGCCCTGCCCGTTCACCTTCGACTGGGATGCGAGATCTT--GGGGACTTGGGATGTA 44727 || ||||| | |||||| ||| | || | || | |||| | |||||||| Sbjct 31403 --CGCCCCTGACGGTTCACGGCGCTCTGCGCCGCCATATGGTCCGGGGCC--GGGATGTA 31458 Query 44728 GAACTCACCCGGCATGATCGAATAGCGGGCTGAGTATTCATTCACGTTGGCCGTCCGGTG 44787 ||| |||| | || ||||| ||||| || ||||| |||||| ||||| | ||||| Sbjct 31459 GAATTCACTGTCGAGAATGGAATAACGGGCAGAATATTCGTTCACGCTGGCCATACGGTG 31518 Query 44788 ACGGATCCATTGGCGGGCCACAAACACGGGCAGTTTGACATGAAGTTTGATCTCACAACC 44847 |||||||| || || || ||||| | ||||||||||| |||| ||| ||||| || Sbjct 31519 GCGGATCCACTGCCGCGCTACAAAGATCGGCAGTTTGACGTGAAATTTCATCTCGCACAT 31578 Query 44848 CTCAAACGGGCTGGTGTGCCAATGGCGCATAAGGTAGCGGATTAGGTCGCGGTCCTTGCT 44907 |||||||| || || | ||| ||||| ||||||||||| || | ||| | | Sbjct 31579 TTCAAACGGCGAGGAATGACGATGCCGCATCAGGTAGCGGATCAG--CCCGGCATCTTCC 31636 Query 44908 GACACCCTTG---GTGCCCTGACCGTAGGATACGCGGGCCATCTGGACGATAGCG---CC 44961 || | ||||| ||||| | |||||||| ||||||||| ||| || || ||| | Sbjct 31637 GAGA-CCTTGCGCGTGCCGCGCCCGTAGGAAACGCGGGCCGCCTGCACAATGGCGGAATC 31695 Query 44962 GTCCGTGCCCATGTAGTCGAT 44982 |||| ||||| ||||| || Sbjct 31696 GTCC---CCCATATAGTCAAT 31713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182133301999840