Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq4475 89.7 8e-13 >seq4475 Length=5362458 Score = 89.7 bits (98), Expect = 8e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || ||| | || || ||||||||||| || || || | || || || | Sbjct 1656931 AAAATGCAGATCTTTGTGAAGACCTTGACTGGAAAGACCATCACTCTGGAGGTGGAGCCT 1656872 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || ||||| || || ||||| || || || || |||||||| Sbjct 1656871 TCGGACACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCAGAT 1656812 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || | |||| | ||||| ||||||||||||||| | | ||| | || ||||| Sbjct 1656811 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCCGATTAC 1656752 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || || ||| | || ||||| || || Sbjct 1656751 AACATCCAGAAGGAGTCCACTCTTCACTTGGT 1656720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731826752013600