Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq3235 293 1e-74 >seq3235 Length=24392 Score = 293 bits (324), Expect = 1e-74 Identities = 530/772 (69%), Gaps = 15/772 (2%) Strand=Plus/Plus Query 65062 GGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCC 65121 |||||| |||||||||| ||| | | ||||| ||||||||| || || || || Sbjct 4971 GGACGTGGTTCCCACCGGTTCTCTGGGGCTGGATATCGCTCTGGGGATTGGCGGCCTGCC 5030 Query 65122 GAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCT 65181 | | ||||| ||| | ||||| |||||||| ||| || || || | || ||| || Sbjct 5031 GCGTGGCCGTGTGATTGAAATTTACGGCCCGGAAAGCTCCGGTAAAACCACGCTGGCGCT 5090 Query 65182 CCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCA 65241 || || | || | || |||||| || |||| | ||||| || || || ||||| Sbjct 5091 GCATGCCATTGCAGAGGCCCAGAAGCGGGGGGGCACCTGCGCCTTTATTGATGCCGAGCA 5150 Query 65242 CTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT 65301 | | |||||||| | ||||||||| ||| || ||||| | || || || || | Sbjct 5151 CGCGCTGGACCCCGGCTACGCCAAGAAGCTGGGCGTGGATATTGATAATCTGCTGATCAG 5210 Query 65302 TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 65361 ||||| ||| | || |||||||| ||||| || | ||| || || ||||||| Sbjct 5211 CCAGCCCGACGCGGGTGAGCAGGCGCTGGAAATTGCGGACACACTGGTGCGCTCTGGCGC 5270 Query 65362 GCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGG 65421 | | | | || || ||| |||||||||||| |||||||| |||||||| ||||| Sbjct 5271 GATTGATGTGCTGGTGGTGGACAGTGTGGCGGCCCTTGTGCCGCGTGCCGAGCTTGAAGG 5330 Query 65422 CGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAA 65481 || || || ||||| || ||||||||||| || || || ||| ||||| ||||||| Sbjct 5331 GGATATGGGTGACAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCGCTGCGCAA 5390 Query 65482 GCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGA 65541 ||| || ||| || | | || ||||||| ||| | ||| | |||||| | || Sbjct 5391 GCTGACAGGCTCCGTTGCGCGCTCCAACACCATGATGATCTTCCTGAACCAGATCCGTCT 5450 Query 65542 GAAGATCGGC---AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTT 65598 ||| || ||| | | ||| | |||| || ||||| |||||||| || || | Sbjct 5451 GAAAATTGGCGTGATGTTTGGCAA---CCCG---GAAACCACGACGGGCGGGAACGCACT 5504 Query 65599 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 65658 || ||||| || || || || ||||| |||| ||||||| || ||||| || Sbjct 5505 GAAATTCTATGCTTCCGTGCGTCTGGATATCCGCCGCATCGGGTCCATCAAGGACAAGGA 5564 Query 65659 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 65718 ||||| || ||||||| || ||||||||||| |||||||||||| ||||||||||| Sbjct 5565 TGAGGTGGTGGGCAACCAGACGCGGGTGAAGGTGGTCAAGAACAAGATGGCCCCGCCGTT 5624 Query 65719 CCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC---GAACT 65775 ||| | | |||||| || |||| || || || ||| | ||||| ||||| Sbjct 5625 CCGTCAGGTCGAGTTTGATATCATGTATGGCGAAGGTATC---AGCAAGGTCGGGGAACT 5681 Query 65776 CCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 65827 | || || | |||| || ||||| |||| || ||||| |||||| Sbjct 5682 GATTGATCTTGGCGTGAAAGCCGGTGTGGTGGAGAAATCCGGCGCATGGTTC 5733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242215798502882