Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4227 123 2e-23 >seq4227 Length=46070 Score = 123 bits (136), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| | | ||||| || |||| |||||| || || || || || || ||| | ||||| Sbjct 17448 ATCGAACAGAGTTTGGGCCCCCAACTCGCAGCCAAAATATTTAGTTGGATAAGTAGCCGG 17507 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 |||||| | ||| || | ||| | ||| || || | || ||||| |||||||| || Sbjct 17508 ACGTCCGATGGCCCGAGCAACTTCAGCCATATTAACAAGAACGGTCTTAATGCCGTTTCC 17567 Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||| ||||||||||| || ||||| || ||||| || || || || || ||| | | Sbjct 17568 CTTGCCTTCGACCTTTGCCTGCAGA--CGTGGCATCTTATAACGATAAAAGATGTCAGTC 17625 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643 ||| ||||||||||||| || || |||| Sbjct 17626 ACACTGCGGTTAACGTTTACGGTGGCCAT 17654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412816714166378