Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq321 84.2 2e-11 >seq321 Length=36169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/289 (67%), Gaps = 9/289 (3%) Strand=Plus/Minus Query 95568 GCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCGTCCAGGATCA 95627 ||| ||| | | ||||||| ||| | |||||||||||| || ||| |||| || Sbjct 12479 GCATGAACAGCATGTCACCCTGTCCGAGGAGCTGCTCGGCCCCTTGCTCACCCAGAATGG 12420 Query 95628 CCCGGCTATCGG--TGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTT 95685 ||||| ||| | |||| ||| || |||| || | || | ||||| ||| Sbjct 12419 TGCGGCTGTCGAACTTGCTGATCACCTGG--AAGGAGATCCGGGTTGGGAAGTTGGCTTT 12362 Query 95686 GATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCC 95745 || ||| || | || || ||||| || ||||| || |||| ||| | ||| ||||| Sbjct 12361 AATGGTGCCGGTAATCACGTCTACGGACGGGCGCTGTGTGGCCATGACCACATGGATGCC 12302 Query 95746 GGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTT-CTTTCTTGTAGC 95804 || || || ||||||||||| | || | | ||| || | || ||| | | || Sbjct 12301 CGCGGCACGGGCCTTCTGGGCCAGACGCTGTACGCAGGCGTCAATTTCCTTACCT---GC 12245 Query 95805 CGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGG 95853 || |||||| ||||| |||| |||||||| | || ||||| ||||| Sbjct 12244 CG-TCATCATCAGGTCGGCCACCTCGTCGATAATCACGACGATATAGGG 12197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351725996898626