Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq3139 159 6e-34 >seq3139 Length=27451 Score = 159 bits (176), Expect = 6e-34 Identities = 255/360 (71%), Gaps = 6/360 (2%) Strand=Plus/Minus Query 35547 CCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACA 35606 || || || || || | ||||| ||||| ||| |||||||||| ||| | ||||| Sbjct 7900 CCCTCATTGGCATAAATGCGCGCAGGCAGCGGGGTGGTGTTGCTGATCTCGATGGTCACC 7841 Query 35607 TGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAG 35666 |||||||||||||| || |||||||| |||||||| || || ||||| |||||||| ||| Sbjct 7840 TGACCTTCCCACTCCGGCTCCAGCGGGGTCACGTTCACAATAATACCGCAGCGCGCATAG 7781 Query 35667 GTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTG 35726 ||| || || | || ||||| || || | ||||| |||||||| ||||| | ||| Sbjct 7780 GTGGATTTGCCAAGGCAGACCACCAGCACATCCCGCGGGATGCGGAAATATTCAATGGTG 7721 Query 35727 CGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTTAACCGGCTGC-- 35783 | ||||| | || ||||| |||||||| | | || | || ||||| | || | Sbjct 7720 TGGGCCAGCACAAAACTGTTGGGCGGAATAATGCATTC-ATCCGCCTT-GCGGGACACAA 7663 Query 35784 AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGATGTTGGTGAAGACT 35843 || || ||| | |||||||||||| || || | ||| | || | || || || | Sbjct 7662 AGCCATCCGGGCT-GAAGTTCTTCGGGTCCACAATGGCGTTATTCACGTCCGTAAAAATG 7604 Query 35844 TCCCACTCATCGGCAGCACGCACGTCATAACCATACGACGAGTTGCCGTACGAGATAACG 35903 | ||||| ||| |||| |||||||||| || || || ||||| || || ||| Sbjct 7603 CGGAAATCATCCGCAACACGGGCGTCATAACCGTATGAGGACAAACCGTAAGAAATCACG 7544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825865737693840