Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4286 118 2e-20 seq4471 113 7e-19 seq4072 93.3 7e-13 >seq4286 Length=1223802 Score = 118 bits (130), Expect = 2e-20 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATT-TCGCCGTGGGACAAGGCCTTTTGCG--AGGTCGACCAA 2035622 || ||||||||||||||||| || || ||||| | | ||| | | || || || Sbjct 338681 GAGAAGCGCACCGACGACATCATCTCC-TGGGAT--GCCGATTTCCTGAAAGTGGATCAG 338625 Query 2035623 CCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGAT 2035682 ||| | |||||| | ||||| || |||||||| || ||||||||| ||| || || Sbjct 338624 GGTACCTTGTTTGAGCTCATCCTGGCTGCCAACTATCTGGACATCAAGGGCCTGCTGGAG 338565 Query 2035683 TTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAG 2035742 | ||||| || ||||| ||| | |||||||||||| | |||||||| ||||||||| Sbjct 338564 CTCACCTGCAAAACTGTGGCTAACATGATCAAGGGCAAGACTCCCGAGGAGATCCGCAAG 338505 Query 2035743 ACCTTTAACATCAAG 2035757 ||||||||||| ||| Sbjct 338504 ACCTTTAACATTAAG 338490 >seq4471 Length=3711889 Score = 113 bits (124), Expect = 7e-19 Identities = 223/329 (68%), Gaps = 7/329 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || || | ||||||| || ||||| ||||| ||||| || ||| Sbjct 604026 CCTTCGTCCCGGGATATAAGTTCGTTGGAGAATGTCAGGCCCGGCATCAGGCCACGTTTC 603967 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || || | ||| ||||| || ||||||||||| |||||||||||| Sbjct 603966 TTTAGCCAGAAAATAGAGGCGAAGCTGCCGCTAAAGAAGATGCCCTCTACGGCGGCAAAG 603907 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT--GATCCACTTCATCGCCC 794518 ||| | ||||| ||||| | ||| ||| | | |||||| | ||||| Sbjct 603906 GCGATAATTCGCTCTCCAAAATT-----GGCTGACTTGGATGAGATCCAGGAAAGCGCCC 603852 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | || ||||| | | || | |||| ||| |||||||| || |||| ||| || Sbjct 603851 AGTCCGCCTTGCGCTTTACAGCCGGCATCGTCTCGATGGCATTGAACAGGTACTCCCGCT 603792 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 ||| || || ||| |||||||| |||| || | || ||||| | ||||| Sbjct 603791 GATGCGGATCTCGGATGTATGTGTCGATCAGGACACTATACATTTCGGAGTGCACGTTTT 603732 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667 | || ||||||||||| || || |||||| Sbjct 603731 CCATTGCGATCTGGAAACCGTAGAAGCAG 603703 Score = 89.7 bits (98), Expect = 8e-12 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||||||||| | |||||| ||||| ||||| || || |||||||||| |||||| Sbjct 604332 TACTCGCCCACCTTCTTCTCGAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCCATG 604273 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCAC-CCGAGCGACGCAAGCAGGCG 794026 | ||| ||||| || |||| ||| || || || ||| | | |||| || Sbjct 604272 AAATTGAAAGGGTTCTTGGTGTTGTAGATCTT-TCCAACACCAAGCTCCACCAGCAAACG 604214 Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGAT 794077 ||| ||||| || || ||||||||| |||| ||| || ||||||||||| Sbjct 604213 GTCTGCGACAAACTCGATGTACTGGGACATCAGGTCGCAATTCATGCCGAT 604163 >seq4072 Length=402393 Score = 93.3 bits (102), Expect = 7e-13 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| ||||||| || ||| | | Sbjct 181 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCTCCGGGTA 122 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||| || || || || ||||| || || || ||| || |||||| || | Sbjct 121 GGAGCAGACGAACAGCCGTTTGGATTTCCCGACTGGTGATGGTAGAGCGCTTATTGTAGT 62 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| || |||| | || || |||| || || || ||||| ||||| Sbjct 61 GAGCCAGGCGAGACGCTTCGGCAGCAATACGTTCGAAGATATCATTCACAAAGCTGTTCA 2 Query 1485650 T 1485650 | Sbjct 1 T 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915720271421294