Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4563 134 9e-27 seq4475 129 4e-25 seq4042 116 2e-21 >seq4563 Length=5383265 Score = 134 bits (148), Expect = 9e-27 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | ||| ||| |||||||| |||||||| || ||| |||| |||| Sbjct 4507155 CAGCACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGGGTGCGGCCATC 4507214 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || ||||| ||| | || | || || ||||| Sbjct 4507215 TTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC 4507274 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | | || | || | ||||| |||| || ||||| Sbjct 4507275 CTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGT 4507334 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| |||||||||||||| || |||||||||||| Sbjct 4507335 CTTGCCCGTGAGGGTCTTAACGAAGATCTGCATG 4507368 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 1837970 AGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCC 1838029 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||||||||| || ||||| ||| | || | ||||||||||| Sbjct 1838030 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCT 1838089 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| || || || || || | || | ||| || || | ||| |||| Sbjct 1838090 TGGATTTTAGCCTTCAC--ATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGG 1838147 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || |||||||| || || ||||| |||||| Sbjct 1838148 TCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATG 1838182 >seq4475 Length=5362458 Score = 129 bits (142), Expect = 4e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 1656489 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCATCT 1656548 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 1656549 TCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCC 1656608 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | || | ||| || || | || |||| Sbjct 1656609 TGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGG 1656666 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 1656667 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1656700 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | ||| | || |||| ||||| ||| ||||||||| ||||| || || || Sbjct 1656702 CCTCCACGCAAACGGAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 1656761 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| |||||||||||||| || ||||| ||| | || Sbjct 1656762 AGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 1656821 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||||||||| | || || || || || || || | || | ||| | Sbjct 1656822 ATACCCTCCTTGTCTTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCCGAAGGCTCCA 1656879 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || ||||||||||| || | |||||| |||||||||||||| Sbjct 1656880 CCTCCAGAGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCAT 1656928 >seq4042 Length=640736 Score = 116 bits (128), Expect = 2e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||| || | || |||||||||||| || ||||| || | | | || | || Sbjct 502939 CAGGACCAAATGCAAAGTAGACTCCTTCTGAATATTGTAGTCGGACAAGGTACGTCCGTC 502998 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||||||| |||||||||| || ||||| ||| | || | ||||||||||| Sbjct 502999 CTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTC 503058 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || || | || ||||| Sbjct 503059 TTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGT 503118 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||||||||| ||||||||||||||| Sbjct 503119 CTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 503152 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || || ||||| || | | | || | || ||||| |||||||| |||||| Sbjct 503417 TCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAG 503476 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||| ||| | || | ||||||||||| | || || |||||| Sbjct 503477 ATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 503536 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || || | || |||||||| || ||||||||||| ||| Sbjct 503537 TCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGGGTCTTCACA 503596 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 503597 AAGATCTGCATG 503608 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| || | | | || | || ||||| |||||||| ||||| Sbjct 503188 CTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAA 503247 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| ||| | || | ||||||||||| | || || || ||| Sbjct 503248 GATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACGTT 503307 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | || |||||||| || || |||||||| || Sbjct 503308 CTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCAC 503367 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 503368 AAAGATCTGCATG 503380 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| || | | | || | || ||||| |||||||| ||||| Sbjct 503644 CTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAA 503703 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| ||| | || | ||||||||||| | || || |||||| Sbjct 503704 GATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 503763 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | ||| |||||||| || || | ||||| || Sbjct 503764 CTCGATGGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTCAC 503823 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 503824 GAAAATTTGCAT 503835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325673167441574