Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq4042 87.8 1e-12 >seq4042 Length=640736 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| || || ||||| || ||||| ||||| ||| | ||| ||| || Sbjct 503838 AATATGCAAATTTTCGTGAAGACTTTGACTGGCAAGACCATCACCTTGGAAGTTGAGCCT 503779 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || ||| | || || ||||| || || || || | ||| ||| Sbjct 503778 TCCGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 503719 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||| | | || | || || || ||||||||||||| || || | |||||| Sbjct 503718 CAGCAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTACCTTGTCCGACTAC 503659 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || || ||||||||||| ||||| ||||| Sbjct 503658 AATATCCAGAAGGAGTCTACTTTGCATTTGGTG 503626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398852755955794