Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq3327 93.3 2e-14 seq3233 93.3 2e-14 seq1655 93.3 2e-14 seq984 93.3 2e-14 >seq3327 Length=1469 Score = 93.3 bits (102), Expect = 2e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| |||||||||| Sbjct 344 TGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACCG 285 Query 50168 AACTGCTCTACTCCGC 50183 |||||| || |||| Sbjct 284 GGCTGCTCCACCCCGC 269 >seq3233 Length=24572 Score = 93.3 bits (102), Expect = 2e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| |||||||||| Sbjct 463 TGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACCG 404 Query 50168 AACTGCTCTACTCCGC 50183 |||||| || |||| Sbjct 403 GGCTGCTCCACCCCGC 388 >seq1655 Length=5713 Score = 93.3 bits (102), Expect = 2e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 50105 GTCTGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTA 50164 || ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| ||||||| Sbjct 1902 GTTTGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTA 1961 Query 50165 CCGAACTGCTCTACTCCGC 50183 ||| |||||| || |||| Sbjct 1962 CCGGGCTGCTCCACCCCGC 1980 >seq984 Length=7728 Score = 93.3 bits (102), Expect = 2e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 ||||||||| ||| ||||||||||| ||||||| |||| |||||||||| |||||||||| Sbjct 7240 TGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACCG 7299 Query 50168 AACTGCTCTACTCCGC 50183 |||||| || |||| Sbjct 7300 GGCTGCTCCACCCCGC 7315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181592533763052