Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq4681 107 3e-18 >seq4681 Length=7884553 Score = 107 bits (118), Expect = 3e-18 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 183047 TGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTG 183106 || || | || || || ||||| | ||| | || ||||||||||| ||||| || || | Sbjct 5741641 TGGTGCGCGAGGGCAAGATGCACGGCTTTCTGCGCATGTACTGGGCAAAAAAAATTCTCG 5741700 Query 183107 AATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACG 183166 | ||||| ||||| ||||| || || ||| || | | ||| |||||||| Sbjct 5741701 AGTGGACTGCCACTCCTGAAGAGGCGCTGGAGTATGCGATATTACTAAACGATAAGTACA 5741760 Query 183167 AACTAGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTA 183225 || || || ||| || |||||||| || || || ||||||||||||||| |||| | Sbjct 5741761 GCCTCGATGG-ACGTGACCCTAACGGTTATGTTGGGTGTATGTGGTCTATTGGCGGTGTG 5741819 Query 183226 CACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAG 183285 ||||| | | ||||| || | ||||| || |||||| | | || ||||| ||| || Sbjct 5741820 CACGACATGGGTTGGAAGGAGCGCCCTATTTTCGGAAAGGTCCGGTACATGAACTATCAG 5741879 Query 183286 AGTTCTAAGAAGAAATTTGATGT 183308 | | | | || |||||||| Sbjct 5741880 GGGTGTCGGCGAAAGTTTGATGT 5741902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903355346602560