Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq4563 131 1e-25 >seq4563 Length=5383265 Score = 131 bits (144), Expect = 1e-25 Identities = 705/1100 (64%), Gaps = 34/1100 (3%) Strand=Plus/Minus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||||||||| || || | |||||| || || || || | |||||| ||||| || || || Sbjct 4594966 CACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTCCGCAGATAATACATTCCGGT-TT 4594908 Query 136698 TAAACCCTTCTC-CCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGG 136756 | | ||| || |||||| ||| ||||| || | || || |||| | || || | Sbjct 4594907 TGAGCCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTCAGTTTTCCATAGTTTGGCTCTG 4594848 Query 136757 CCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGT 136816 | || | ||| | || || |||||||| || | | || || || |||||||| | Sbjct 4594847 CTACATGTATATTAAAGGACTGACTCTGATCTATAAACGCACCACGATCAGCGGCCATTT 4594788 Query 136817 TCAATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 | ||| || || | | ||||||||| ||||||| | || || || || | Sbjct 4594787 T-AATTGTGGACTTCACAGAGATTTCCCAAACGGTTTTGTAAAGGTCACGAACCTTCTGT 4594729 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTT---TCATCATGAGA 136932 ||||| || ||||| || | || || || | ||||||| || ||||| | Sbjct 4594728 GGAATAGTCTCAATATTTTGAATTGAACCCCTGCTGGAAATGATTTGGTTCTTCATGTCA 4594669 Query 136933 TCAGTCGAGTATACGTTGCTCTCTATGA-GTTTATCGACGAGATGCTGATTTACTACTTG 136991 || ||| | | || ||| | | || || || | ||| || || || || || Sbjct 4594668 TC-GTCCC--ACAAGTCCAGCTCAGTCAAGTCCCTCAACAA-ATGATGGTTAACCACCTG 4594613 Query 136992 ATATTCGCCCGATAGCACTCTGC--GTACGTACAGATTACTAGTGAACGGCTCGAACGAT 137049 ||||||| || || ||||| | ||| || | |||| |||| |||||||||| ||| Sbjct 4594612 GAATTCGCCAGACAGAACTCTTCTGGTA--TAAATATTAGTAGTATACGGCTCGAAAGAT 4594555 Query 137050 TCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAA 137109 |||||||| |||| |||||| ||||| | ||||| ||||| ||| | || || || Sbjct 4594554 TCGTTGTTGCCCATAATCTGAGCAGTAGATGCTGTTGGCATAGGAGCAACCAGCAGGGAG 4594495 Query 137110 TTCCGTAAACCGTG-TACGGCCAATTG-TTGCTTGAGCTCTTTCCAGTTCCACAGATTGT 137167 ||||| | |||||| | | || | | ||| |||| || ||||| ||| || || Sbjct 4594494 TTCCGGACACCGTGCTTC--TTTATCGACTCCTTTAGCTTTTGCCAGTCCCAGAG---GT 4594440 Query 137168 TCGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTG 137227 ||| | | | | ||||| || ||||||||| ||| ||| | || ||| | Sbjct 4594439 TCGTCGGAACTTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTTACCGGGCTTCCCT 4594380 Query 137228 CATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCAT 137287 |||||| || |||| || | | | || | |||| ||| | | || |||| Sbjct 4594379 CATAAGTTTCGTATGGGCCTTCGATCTGAGCTAATTCACAACTGGCTTCCAAAGCCCCAT 4594320 Query 137288 AGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCA 137347 ||||||| |||||| | || | |||||| || ||||| | || || || || | Sbjct 4594319 AGTAAATCGTTTCGAATATCTGCTGATTCAAGAGGCTCGCTTCATCACTTTCATATGGGA 4594260 Query 137348 TATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGT 137406 ||| || | | || ||||| |||| || |||| ||||| || | || | || Sbjct 4594259 -ATCGCATGAGAATTAATGCATCAGCAAAGCCCTGAACTCCGATGCCCACGGGGCGATGC 4594201 Query 137407 TTAAAATTTGA--TATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTAT 137464 | ||||| || | ||| | || | |||||||||||||| || || || | | Sbjct 4594200 CTCAAATTGGACTTCCTTG-CCTCTGGC-AGCGGATAAAAGTTGATATCGATTATCTTGT 4594143 Query 137465 TGAGATTGTTAGTAA-CGACTCTGGACACTTTGTAGAGCAATTCGAAATCGAAGCTTTTA 137523 ||||||| | |||| || || ||| |||| | || || ||||||| | | || Sbjct 4594142 TGAGATTTCTGGTAACCGTCT-TGGTGACTTCCTTTAGTTTTTTGAAATCGTATGTCTTT 4594084 Query 137524 GACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTTCT 137583 | || || |||| | || | ||||| || || ||||| || || || | || Sbjct 4594083 TCCGGTGTG---ACAAACATGTTAAGAGCAATGGATGCCAAGTTACAAACTGCAATCTCA 4594027 Query 137584 GTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCAAA 137643 | | ||| | |||||||| | ||| | || ||| | || || | | Sbjct 4594026 TCCGGGGAGGAGTACTCGACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCAACA 4593967 Query 137644 TTCTTTTGATTGTTTTTCTCGTTGACGTGATCTTTATATATCATATACGGAGTTCCGGTT 137703 |||| || || | ||| |||| | ||| || | | |||||||||| |||| ||| Sbjct 4593966 TTCTGCTGGTTACTCTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGATTTCCAGTT 4593907 Query 137704 TCGACTTGAGTCTCAACAAT 137723 || ||||| | |||| ||| Sbjct 4593906 TCCACTTGTGCTTCAATAAT 4593887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445066882038720