Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq4563 255 7e-63 >seq4563 Length=5383265 Score = 255 bits (282), Expect = 7e-63 Identities = 356/495 (72%), Gaps = 8/495 (2%) Strand=Plus/Minus Query 146842 AAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTC 146901 ||||| || ||||||| ||| | | | |||| | |||||| |||||||| || | Sbjct 3137528 AAATCTTCGATGTCCTTTACCTGGCGCTTAATCACCATCTTGGGAAAGGGTCGTGGTGTA 3137469 Query 146902 CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGG 146961 | ||||||| || |||||||| || ||||| || |||||||| | ||| |||| | Sbjct 3137468 CGTTCCAGCTGCTCCTTAAGGGGCTCTACATGGTTCAGATAGACGTGTGTGTCGCCCATG 3137409 Query 146962 GTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGC 147021 |||||||||||||| |||||||| || || ||||| ||||| | ||||||||| || || Sbjct 3137408 GTGTGCACAAAGTCGCCCGGCTTCAGACCCGTCACATGGGCGATCATGTAGGTAAGGAGG 3137349 Query 147022 GAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGC 147081 | |||| ||| ||||||||||| || |||| ||||||||| | ||| ||||| ||| Sbjct 3137348 GCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATGTCGGCGCTCCTTTGGTAGAGC 3137289 Query 147082 TGGCACGAGAGCTC----CCCGTC--GGCCACGTAAAACTGGCACAGGATGTGGCACGGC 147135 |||||||| ||||| | ||| | ||||| ||||| |||| |||||||||| Sbjct 3137288 TGGCACGAAAGCTCATTTCGGGTCTGTGAGACGTAGAACTGCGCCAGGCAGTGGCACGGC 3137229 Query 147136 GGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC 147195 || || ||||| || | |||| || ||||| || || | | | |||||| | Sbjct 3137228 GGAAGAGCCATCTTTGGAATGTCCAATGGATTCCACGCTGACATAATGATACGCCTGTCC 3137169 Query 147196 TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCG 147255 ||||| ||||||| ||||| || | || ||||| | ||||| ||| | Sbjct 3137168 GAAGGGTTATTCTTAATGGTGTCGATCACTTGACGCAATTGGTCGATGCCCTTGCCGGCA 3137109 Query 147256 TAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACAC 147314 || | ||| ||||| | ||||| || |||||||||| ||||||||| |||||||| Sbjct 3137108 TA-ATCGTCTTCGCAGCTCCCGTACTCCGCACCAAAGTGCCGCCACTGGAATCCGTACAC 3137050 Query 147315 TGGCCCCAGGTCGCC 147329 || |||| |||||| Sbjct 3137049 CGGACCCAAGTCGCC 3137035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583451925854400