Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4471 179 5e-39 >seq4471 Length=3711889 Score = 179 bits (198), Expect = 5e-39 Identities = 287/407 (71%), Gaps = 4/407 (1%) Strand=Plus/Plus Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 ||||||||||| || |||||| ||||| || ||||| ||| ||||| |||||| || Sbjct 603587 GACGACGAGCGTCACTTCATCTCACACGTGCTGGCCTTCTTT-GCCGCTTCCGATGGAAT 603645 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 |||| ||||||||||| | || |||| | ||||| || | | |||||||| | Sbjct 603646 CGTGAACGAGAACCTGGTTGAGCGATTTAGCCAGGAGGTTCAGATCACTGAGGCACGCTG 603705 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 || ||||| ||||||||||| || |||||| | ||||| |||| || ||||||| Sbjct 603706 CTTCTACGGTTTCCAGATCGCAATGGAAAACGTGCACTCCGAAATGTATAGTGTCCTGAT 603765 Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109 |||||| ||| || || ||| || ||| |||| || |||||||| ||| | Sbjct 603766 CGACACATACATCCGAGATCCGCATCAGCGGGAGTACCTGTTCAATGCCATCGAGACGAT 603825 Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA 1456169 |||| | || | | ||||| ||||||||| | |||||| || | | | | | Sbjct 603826 GCCGGCTGTAAAGCGCAAGGCGGACTGGGCGCTTTCCTGGATC-TCATCCAAGTCAGCCA 603884 Query 1456170 CACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGT 1456228 | |||| ||||| | ||| |||||||| ||| ||||||||||| || ||||| Sbjct 603885 -ATTTTGGAGAGCGAATTATCGCCTTTGCCGCCGTAGAGGGCATCTTCTTTAGCGGCAGC 603943 Query 1456229 TTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||| | | || || ||||| ||||| || ||||| ||||| || || Sbjct 603944 TTCGCCTCTATTTTCTGGCTAAAGAAACGTGGCCTGATGCCGGGCCT 603990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177334149209252